Detail



ID : Ahg477265

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477265|fgenesh2_kg.2__2395__AT1G79940.1
Sequence
AAGGAAAAAA AACTGCAACG CCGTTTGTTG CCGATCTGCA GCAGCGCGAT CTCTCTGTTT CTCTCCACTT TTCCTTTCTG CAGAATCGAA TCTCTCATCT AAAAGATGGC GGCTTCAGAA GAGAATAGCG CATTGTTTCC CATTTTTATC TTGACGATTA TGGCAATTCC TTTGGTGCCT TATACCATGG TCAAGTTAAC CGGTGCTCTC TCCAAGAAAC AAAGGACCAT TCACTGTCAG TGTCTCGAGT GTGACCGTTC TGGCAAATAT AAGAGATCCT TGTTTAAAAA GATCTCTAAC TTCTCTACAT GGAGCAACTT GACGCTTGTG CTACTCTGGG TCGTGATGGT TTTCTTGATT TATTACACTA AGAACATGAG CCGTGAGGCT CAAGTTTTTG ACCCATTCAG TATACTTGGA CTGGAACCTG GAGTTACAGA TTCAGAAATT AAGAAAGCAT ATAGAAGGCT GTCCATTCAA TACCATCCTG ATAAAAATCC AGATCCAGAG GCCAATCAAT ATTTCGTGGA GTTCATTTCT AAAGCCTACC AGGCTTTGAC TGATCCTGTA TCCCGTGAAA ACTTTGAGAA GTATGGTCAT CCAGATGGCA GACAGGGATT CCAAATGGGC ATTGCTCTTC CTCAATTTCT TTTAGACATT GATGGAGCAT CTGGTGGCAT ATTATTGCTT TGGATAGTTG GTGTCTGTAT TCTCTTGCCC CTTGTGATTG CTGTTATATA TCTCTCGAGG TCATCAAAGT ATACCGGCAA CTACGTTATG CATCAAACAC TCTCCGCATA TTATTATCTA ATGAAACCCT CTTTGGCCCC AAGCAAAGTT ATGGAAGTTT TCACCAAGGC AGCTGAGTAC ATGGAGATTC CAGTTCGTAG AACTGATGAT GAACCTCTGC AGAAGCTCTT TATGTCTGTT AGGAGTGAGC TAAACTTGGA CCTGAAGAAC ATGAAGCAAG AGCAAGCTAA GTTTTGGAAA CAGCATCCTG CCATAGTGAA GACGGAGCTG TTGATACAGG CCCAGTTAAC TCGTGAATCA GGAGTCCTGT CTCCCGCCCT TCAGGGTGAT TTCAGGCGTG TGCTAGAGCT TGCACCTCGC CTCCTTGAGG AGTTATTGAA GATGGCGGTT ATACCGCGCA CTGCCCAAGG GCATGGATGG CTGAGACCTG CAGTTGGAGT AGTTGAGCTA TCTCAGTGCA TTGTTCAGGC TGTTCCTCTT AGTGCAAGGA AGTCTTCTGG AGTATCTTCA GAAGGCATTT CCCCTTTCTT ACAGCTCCCT CATTTCAGTG ATGCCGTTGT CAAAAAGATA GCACGGAAGA AGGTTAAATC ATTCCAAGAT CTTCAAGAAA TGAGGTTGGA AGACCGTTCT GAACTGCTCA CCCAGGTAGC GGGTTTATCA GCAACTGATG TTGAGGACAT TGAGAAGGTG CTAGAAATGA TGCCGTCTCT TACAGTCGAC ATCACATGTG AAACAGAAGG GGAAGAGGGG ATCCAAGAGG GTGACATCGT GACCCTTCAA GCTTGGGTCA CTCTGAAACG ACCCAATGGG CTCATAGGCG CCCTTCCTCA TGCACCCTAC TTCCCTTTCC ACAAGGAGGA AAACTACTGG GTTCTTCTTG CTGATTCGGT GTCGAACAAC GTGTGGTTCT CTCAGAAGGT AAGCTTCATG GATGAAGGTG GAGCGATAAC GGCTGCATCG AAAGCCATCA GTGAGTCAAT GGAAGGTTCA GGAGCAGGGG TGAAGGAAAC AAACGATGCA GTGAGAGAAG CGATTGAGAA GGTTAAAGGC GGGTCAAGGC TGGTAATGGG TAAACTCCAA GCACCGGCAG AGGGAACATA CAACTTGACT TGCTTGTGCC TGTGCGACAC ATGGATCGGG TGTGATAAAA AGCAAGCACT GAAAGTGAAA GTCCTGAAAA GAACCCGGGC AGGGACACGT GGTATGGTTT CAGATGAGGG TGCGATTGCA GAAGAAGGTA TGGAGGAGGA AGATGAGATT GAGGAGGAGG ATTACGATGA TGATTACGAA AGTGAGTACA GTGAAGATGA GGATGAGAAG AGAGGGTCGA AGAAGGCCAA TGGGAGTGTG AAACAGAAGA AAGAGTCGAG TTCTGAAGAG TCGGGATCGG AGGAAGAGTG AAACAGAAAG GAGATTTTAC ACTGATAAAC AAAAAAAAAA ATCTTTTTCA CAGTTTTGA 
Length2209
Protein Sequence
Protein Residue
Map Locationscaffold_2: 18144453.. 18148032
Download Sequence
A.thaliana
AGI-codeAT1G79940.1
DescriptionDnaJ / Sec63 Brl domains-containing protein
TAIR curator summaryJ domain protein localized in ER membrane. Mutants have defective pollen germination.
Alias[ATERDJ2A]
Gene coexpression
MR
MR Locus Description
1 Ahg489809 calcium-dependent protein kinase 4
4.24264 Ahg481580 20S proteasome alpha subunit G1
8.66025 Ahg484298 Small nuclear ribonucleoprotein family protein
9.38083 Ahg928150 regulatory particle triple-A ATPase 5A
15.4919 Ahg471614 ubiquitin carrier protein 1
15.4919 Ahg471469 ARM repeat superfamily protein
15.5563 Ahg945645 Clathrin adaptor complexes medium subunit family protein
16.0624 Ahg478716 proteasome activating protein 200
18.9737 Ahg481337 ADP-ribosylation factor 3
23.9583 Ahg491167 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression