Detail



ID : Ahg477277

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477277|fgenesh2_kg.2__2407__AT1G79880.1
Sequence
TCTCTTCTTC GATTGCAGAT GGCCTCCTTC GACGAAGAAA CCGCCAAGAA GTTGCTTACC CAGGTGGAGT TCTACTTCAG TGACAGTAAT CTACCCACTG ACGGATTTCT CAACAGGGAA GTCACCAAGA GCAAAGATGG TCTCGTTAGT TTGCCTCTGG TTTGTTCCTT CTCTCGTGTG AGGAACCTCC TTGGCCTCGG TAACATCAAT AGAGAAGACT TCCCTCCGAG TATCGTGGAC CAAGTCGCTA ATCTCTTGCG CACCTCTGAT TTTCTTAAAG TTTCCAACAA TGGACAAAGG ATTGGTAGAG GATCAAAACT CTCCAAACCG GAAAAGGTGC TTGAACAAGT CCACAGAAGA ACCCTTGCGG CTTCACCTTT TGAGTACAAC ACTAAGATGG AGGATGTCGC ATCTTTCTTC TCCCAATATG CCAAGGTGAA CAGTGTGAGG CTACCTCACC ACATCGCAGA TAAGCGACGC TTTTGTGGCA CTGCCTTGGT TGAGTTCTCC TCTGAACAAG ACACTGAACA TATTTTGAGC CAGAGCTTGG TCTATGCAGG CGCTGACTTA CTATTAATAC CAAAGAGTGA TTTTGACTGT CAAAGAGAGA ATATGATTAA GCAACTCGGA AAATCAGGGT CAATTCATAG AGACAACGAA TTCCGCAGAG GACAGCTTGT CAAATTTACA TTGAAATGGA TTGCCAGTGG GGAAAAGGTA ACAAACAAAG AAAAAACCAG GGCTCTGAAA AAGAAAATCA AAGATAAGGA GGCAGGCATT GCTGAGAGAT TGGAAGGAAA TGATAGAGTC AAGGAAAGTG GAGATTCACA GGCAGATAAC TCATGTGCTA GCTTGTGCAA GGAGAAAATC GACAACGCTG ATCAACTTGT GGTTCCCCCT TGGAACAACA GTGATTCTGT GGGCTCTGAG GTTCTCAAGG ATCTTTTTCA AAGATTTGGC AGCGTTAAAC ACATAGAATA CTCTGGTGGA TTGGATTCGG GTTACGTTTG GTTCATAGAT TCGGAAACAG CAATGAAAGC CCGTGCAGCT GTGGAGTTTG TTGGAGGTTT AGTTGTGAAG AATAACTTCT TAGTAGCCTT AGAAGCAATT AATGGGGAGA TGGAGAGAGA GTTGTGGAAA AGACTATCAT CAGCTGAGCT AGAAGGAGGA GGGAAAGGTG GTCACAAAAA GGAAAAAGGC ACAGATGAGT GTTTTGAAAC CATGCAACCG ACCAAGAAGG CTCGAAAGGA GCCCTAATTA AAGCTTTGGG TTTTGTGTTA TGTCATACTC TTCTCTACTT TTTAGAGGTT CAGCAGATTC TCAACAAAAT AGATATTGCT TCACTTCACT GACATCTATA AGTGGTTTGG TAAACGTTTC TTGGTCTGGG ATGGTTAATG ACTTGAC 
Length1407
Protein Sequence
Protein Residue
Map Locationscaffold_2: 18168481.. 18170749
Download Sequence
A.thaliana
AGI-codeAT1G79880.1
DescriptionRNA recognition motif (RRM)-containing protein
TAIR curator summary
Alias[AtLa2][La2][La protein 2]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg478135 Calcium-dependent ARF-type GTPase activating protein family
3.16228 Ahg481325 Transcriptional factor B3 family protein
11.8743 Ahg484456 auxin signaling F-box 2
12.9615 Ahg918919 TBP-associated factor 13
13 Ahg491970 AFG1-like ATPase family protein
19.1311 Ahg947135 chromosome-associated kinesin-related
20.1246 Ahg495185
20.4939 Ahg313056 Preprotein translocase SecA family protein
23.0651 Ahg946922 acylaminoacyl-peptidase-related
24.4949 Ahg489806 Cofactor-independent phosphoglycerate mutase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression