| Annotation |
|---|
| Description | jgi|Araly1|313056|fgenesh1_pm.C_scaffold_1001836 |
| Sequence |
ATGGAGGCAC CGGAGTGTCC GGTGTGTCTA CAGTCTTTCG ACGGCGAGTC TACAGTCCCG CGTGTACTCG CCTGCGGACA CACGGCGTGC GAAGAATGCT TAACGAATCT ACCCAAGAAG TTTCCGAACA CAATCCGATG TCCTGCTTGC ACCGTTCTCG TCAAGTTTCC TCCTCAAGGA CCATCAGCTC TCCCCAAAAA CATCGATCTT CTCAGATTTT TCCCTTCTAT TTCGAAGATT AAGCTGGAAC CTGGTCGGAA TTGTAAAAAA GCCGTTGAAT TTGTCATTCG ATCATGGTCC GACGACTTTT ACGCCACTTG GAAGGATCGG ATCCTAGTGC ACGACGCCGT TTCCGTGGAA ATTAGGGAGA GTGAAAGTAG TGATTTTGCT TCAGCTTCGC TTTTATGTGG AAGTCTGAGG GATGATTTGA AGGTGAGTCT TTTACGGGTT GCTTCGTTCG AGCATGATGA TTGTGATTCT GTTCTCAAGT ATAGTTATGT CCAGAGGATG ATGAGTTGTC TGTGGGGGAT GAGAGAGGAG GAAAGAGATG AGCTTGATGC GATCATCTCT GTTAAACAAA GAGGTGTTTC TATAGTTTTT GGCTTGTGGG GTGATTTGAA GAATGGTGTT TTGTATTTAG TGGGTGAGAA GCTCACTGGA CTTTTGTTGG AGTTTGATAG CCTCACTGAA GATTATACTT CGCGTTTAGC AATAATTGGC ATGCAAATAT GTGAGGCACT ACTCAATTTG CACAAGGAAG GGTTGATCAC AGGCTGTTTG AGTGTTTCTT GTGTGAAGTT TGACGAATAT GAGAATGCTT ATGTTGATTT GATTGAGTTG ATTGAAACTG GAAGGAATGT GTATCAAATT ATCGCCGAAG AAACTAGCTC TTTTAGCAAA CCAGTTGGGG CTTCGGAAAT GGGTTTGATT TTGGTTGGAT TACTACAAAA GGGGATTTTT TTGAGCTCAG AGGTGTTGTT TGAATTGTTG AAAGAACGGA ATATGTTGAT AAAAGATTCC GGCTCAAAGT CGTTGGTTTC ATATAACTCT GATGTTTGGC CAGTTTGTTT TCTTGTCCTC AAGCTTCGTC TTGGAAAACG GTTTATGGAG GAGCTTATTG AAAGTGTAAA TTGTGTGGAT GCAAAAGGAT GTGAAGAGGG TATTGAGGAT CTCTTGGTGC TATACACAGG TATTACGGAG AAAGTAAGTC TGGAATCTGA ACTCCAAGGG AAGTTTAAAA CGATGGTTGA AATTCTTCGC CAATGTTGCT GTCTTAATCC TCAGGCACGT CCCGTTTTGA CTGATCTATG GAAATGCATC AGGGAGCTGG TGGTGAAACC TAGGTTTAAT TCTATGAGTG GATTGCATAA GACGATTTCT GGGAAAAGGA AAGAGTTCTG TTTGGCTCAA AGTGAATTAT GTCGTCGGGT AGAAGTGGAA TCCAAAGAAC TGGACGAAGA GTTGCCTGGA ATGAAAACTG GCGATGAAGC AGAGGAGGGT AAGGTTGACA TAGATTTTGC TAGGAGACTC TCAGAAGGAA AGGTGAAATC TAAAGACATG CGGGGACACC AAGACTCTGT CACAGGTTTA GCGGTTGGAG GTCATCAGGA TAAAGTAATG GCCTTGATAC ACATCGAGGG AACAGAACCA GTATGTGTCA GTGGCGACGG TGGAGGAGGT ATCTTTGTAT GGAGCACTAC TTTCCCTCTG AAAGAACAGC CACTAAGAAA GTGGTACGAG CCAAAAGACT GGCGTTATAC TGGCATTCAT GCATTGGCAT ACTCAGAATA TGGGCATGTG TACACTGGCA GTGGAGATAA CACTATCAAA GCTTGGTCAC TGCAAGATGG AAGCCTGGTT TGCACTATGA GTGGCCATAA ATCTGTAGTC TCAACGCTTG TTGTGGTAAA TGGAGTACTA TACAGTGGAA GTTGGGATGG AACCGTTCGT TTGTGGAGTC TAAGTGACCA CAGTTTGTTG ACAGTGTTGG GTGAAGAGAC TCCAGGTATT ATATGGAGGG ATGATACATT GATGAAGTCA ATGCAGATAC AGAGTGGCGC AATCCTCACC ATTACCGTGA ACGGTAAATG GCTATTCACT GGAGGTTGGG ACAAAACCAT CAATGTACAG GGGAATTTGG GTCGTTTAAA GAGGAATATA CAGGATTTTA CGAGCATGAA TTATTGGGTT GTGCGGGACT ACTATCGTCT TGTGGAATCC GTCAATTCCC TTGAGCCACA GATGCAAAGC CTTTCCGATG AGCAGCTGAA AGCTAAAACT GCAGAATTTC GAGAAAGATT AGCACGAGGG GAGTCCCTAG CAGATATGCA AGCTGAGGCA TTTGCTGTTG TCCGTGAAGC TGCTAAGAGA ACAATTGGAA TGCGTCATTT TGACGTGCAG ATAATTGGTG GAGGAGTGCT TCACGATGGA TCCATTGCGG AGATGAAGAC TGGTGAAGGG AAGACGCTAG TCTCCACCTT AGCTGCATAT CTTAATGCAT TAACTGGTGA AGGCGTTCAT GTGGTTACCG TGAATGATTA CCTGGCCCAG CGTGATGCTG AATGGATGGG TCGTGTTCAC CGCTTCTTAG GCCTTTCAGT TGGTCTCATT CAGAGAGGGA TGAAAGCTGA AGAGAGAAAA TTCAACTATA GCTCTGATAT AACATACACC AATAACTCGG AGCTTGGATT TGATTATCTA CGAGATAACC TTACTTCAAA CCGTGAACAA CTTGTTATGA GATGGCCAAA ACCATTTCAC TTTGCAATAG TTGATGAAGT GGATTCAGTC CTCATTGATG AAGGCAGAAA TCCTTTGCTA ATAAGTGGTG AGGCTAACGA AAATGCCGCA CGATATCCAG TTGCTGCTAA AGTGGCGGAA CTTCTCGTAA AGGATAGTCA TTACAAAGTT GAACTGAAAG AAAACTCAGT GGAACTCACA GAAGAAGGCA TATCTCTTGC TGAAATGGCT CTTGAGACGA GTGATTTATG GGATGAAAAT GATCCATGGA CAAGGTTTGT TATGAATGCT TTAAAAGCTA AAGAATTTTA CAAGCGGGAT GTCCAATATA TTGTGAGAGA TGGGAAAGCA CTTATAATCA ATGAGTTGAC TGGAAGAGTT GAAGACAAAA GGAGATGGTC TGAAGGAGTT CACCAGGCTG TGGAGGCTAA AGAAGGTCTA GAAATTCAGG CTGATTCAAT TGTTGTGGCT CAAATCACCT ATCAATCACT CTTTAAACTC TACCCAAAGC TCTCCGGGAT GACTGGGACA GCCAAAACAG AAGAAAAAGA ATTTTTGAAG ATGTTTCAGA TACCTGTTAT TGAAGTTCCT ACAAATTTGT CAAATATTCG AATCGATCTA CCAATACAAG CTTTCGCTAC TGCTCGGGGT AAATGGGAAC ATGTTCGTCG AGAAGTTGAA GATATGTTTG GACAAGGTCG ACCTGTTTTA GTAGGAACAA CAAGTGTAGA GAATTCTGAA TATTTATCAG AACTGCTGAA AGAATGGGGT ATACCTCACA ATGTCCTGAA TGCACGACCC AAGTATGCTG CCAGGGAAGC TGATTTTATA GCCCAAGCAG GAAGAAAATA TGCCATCACC ATTTCTACAA ATATGGCTGG TAGGGGTACT GACATTATTC TGGGAGGAAA TCCGAAGATG CTTGCAAGGG AAATCATAGA AGATAGCATC CTTTCATATC TAACGAGTGA AGTTTTGGCT GATAATATTG ACGACAATGA GTTATCACAG AAGGTGTTGT CAAAAATAAA AGTGGGACCA TCGTCCTTAG CTTTGCTAGC CAGAGCTTCT CTTATGGCAA AATATGTTGG CAAAAGTGAA AGTAAGAGCT GGACAAGGAA AAAAGCAAAG TCCGTGGTCA CAGAATCTTT GGAGAAAAGC CAGACCATGG ATCCTATGAA ACTGCAGAAT CTTGTCAATG AGCAGTCAGA AATGTACCCA TTAGGCCCTG CTATTGCTCT GGCTTATCTG TCCGTCTTAA AGGACTGTGA GGCCCATTGT CTGCATGAAG GATCTGAAGT GAAGAGGCTT GGAGGCCTTC ATGTAATTGG GACTTCTTTG CATGAGTCTC GGAGGATTGA TAACCAGCTT CGTGGCAGAG CTGGAAGGCA AGGAGATCCT GGATCCACGC GGTTTATGAT AAGCTTGCAA GATGAGATGT TTCAGAAGTT TAATTTTGAC ACTGAGTGGG CTGTGAGACT TATATCAAAG ATTACAAACG ATGAAGACTT ACCAATTGAA GGTGACACAA TAGTAAAACA GCTTCTAGCT CTCCAGATCA ACGCAGAGAA ATACTTCTTT GGAATAAGAA AAAGCCTGGT CGAGTTTGAC GAAGTGCTAG AGGTTCAAAG GAAGCATGTC TATGACCTAA GGCAACTGCT TTTGACGGGT GAAAACGAAA GTTGCTCTCA GCATATATTC CAGTACATGC AAGCTGTTGT AGATGAAATC GTCGTTGGAA ATGCTAATCC ACAGAAGCAT CCAAGATACT GGAGCTTGGC CAAGCTATTG AAAGAGTTTA TGGCTATTTC GGGAAACCTA CTGGATGAAG AAACCATGTT ACAGTCCCTT GAAAACCTGC ATGAGAGGAT TTCAATAGAT ATGGAAGACT TGTACCTTCC GCACCTGCCA AAACCTCCTA ACGCTTTCAG GGGAATCCGC AGAAAGAATT CTTCACTAAG ACGTTGGCTT GATATCTGCT CAGATAATTT GACGGGGTGA |
| Length | 4740 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8928735.. 8939201 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G21650.3 |
| Description | Preprotein translocase SecA family protein |
| TAIR curator summary | Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. |
| Alias | [SECA2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.07107 |
Ahg477303 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 7.74597 |
Ahg324546 | homeodomain GLABROUS 1 |
| 7.81025 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 11.225 |
Ahg318458 | calmodulin binding;transcription regulators |
| 11.225 |
Ahg938459 | mitogen-activated protein kinase phosphatase 1 |
| 14 |
Ahg931910 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 14.8324 |
Ahg948486 | Disease resistance protein (TIR-NBS-LRR class) |
| 19.2094 |
Ahg473912 | |
| 19.5959 |
Ahg496813 | 2-oxoglutarate dehydrogenase, E1 component |
| 19.8997 |
Ahg480961 | Protein of unknown function (DUF803) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|