Detail


ID : Ahg477348

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477348|fgenesh2_kg.3__49__AT3G01670.1
Sequence
ATTCACCACA ACACATCAGA TCCTTCACCA TATATTTCTC TTCTTTTCGC CAATATGGCC CAACGCTTTC AATTGAACCC AAAAACCCTC CCAACGGCCG ACCCTCTCAA AAGGGTCTCC CTTATCCCAA GATCCGCCGA GCAGAATCTG GCTGATAACT CAGGCGATAG GCGTCCCTTA GCACCGAGAA CTCACGAAGA CAGCCCCTTT GGGGATCATA CAGATGATCA CAATGTTTCT GCTCCTGCGG ACCATAATAA GGTGATGGAT CATGAGACCG AGAAGCTCGG TTCCATTGTC CCTAAGACTG CAAATCACCC TCATCCATCT GAGGACGTAC TTGATGCTAA TATCCGACAT TCGATGGTTC CAAAATCATT GGGCCATAAT TCGCTCGGTG GAAGATTTGG TCCGGGCAGG AAACAAGCTT TCCATAGAAA TGGCAGACCT ATGTTTTCAC TTTCTGATGA CCGAGTCATG GCTGATAGAG TCTTGAAGAC TCACAGTCCA GACATGATCT TCTTTGATGT CAAATCACTT CTCTCCGTTG TTGATGACAT CTTCAAGTCT CATGTCCCAT CCATTGACTC CTCTGCTCCT AAGCCATCAC TCGTGTTCAA GGACTATGCT GATCATACCT CCTTTGAAAC TTTCGCGGAT ATCATTGATC AAATCTCTTG CGAGATCGAC TGCAAGTGTC TCCATGGCGG TGAGTCTCAC GGTATGATGA CATCAGGGCT TCATTTAGAT AGTCGCAATA CCACGACGTT CTCTGTTCTG TCTCTGGTCT CTAAATATCG TTGGGATGCT AAGCTAGTCC TTGTCCTAGC TGCCTTGGCC GTGAAATACG GCGTTTTTCT CCTCCTCGCG GAGACACACG CAACTAATCA GCTCACTAAA TCGCTGGCTC TCATCAAACA GCTCCCTAGC ATCTTCTCCC GGCAGAACGC TCTGCACCAG CGTCTTGACA AGACCCGAAT TCTGATGAAA GAAATGGTTG ATCTCACCAC TACCATCATC CAGATCTATC AACTCCCGCC AAACCACATC ACAACCGCGT TTACCGACCA TGTCCCCACT GCGGTTTACT GGATTGTTCG CTGCGTTTTG ATATGTGTTT CTCACATCAG TGGCGCCAGT GGTTTCAAGC AGGATCAAAT CATGTCGTTT ATGGAAGTTT CGGAGATTCA TGAGAATAGC GAAAGGCTTA GGAAGATCAA TGCTTACTTG ATAGAACAAC TCAAGAAGAG TCAATTGACC ATTGAGGATG GTATAATCGA AGAAGAGTAT CAAGAACTCA TTCAGACGTT CACTACTATC ATTCACGTTG ACGTTGTTCC TCCTCTGCTT CGCCTTCTCA GACCTATTGA TTTTCTTTAC CACGGAGCTG GTGTTTCAAA GAGACGTGTC GGGATCAACG TGCTCACCCA AAAGCACGTG CTGCTTCTGG TATCAGACCT AGAAAACATC GAAAAGGAGC TCTACATCCT GGAATCGCTC TACACAGAAG CATGGCAGCA ATCATTCGAG ATTCTATGGG TTCCAGTTCA AGACTTCAGG ACAGAAGCTG ACGATGCCAA GTTCGAGGCA CTTCATATGA ATATGAGGTG GTACGTTCTT GGAGAGCCTC GGAAATTAAG ACGAGCCGCC ATTAGGTTTG TGAGGGAGTG GTGGGGGTTC AAGAACAGGC CTATACTCGT TGCACTTGAT CCCAAAGGTC AAGTTATGTC AACCAACGCT TTCCCTATGG TCTGGATCTG GCAACCCTTT GCGCACCCTT TCACGACCTC AAGGGAACGT GATCTATGGA GCGAACAGGA TTGGAATCTT GAGTTCTTAA TTGATGGAAC TGATCCTCAT TCCTTAAACC AGCTTGTTGA TGGAAAATAC ATATGTCTCT ACGGAGGAGA GGATCTGCAG TGGATCAAAA ACTTCACGAG TCTCTGGCGT AACGTAGCGA AGGCCGCAAA TATTCAACTA GAGATGGTTT ATGTCGGGAA AAGAAACCCT AAGAATGGAA TCCAGCCGAT AATCAACACA ATCCGGGAGG AAAACATCAG CCATACGTTG CCGGACTTGT TCCAGATCTG GTTTTTCTGG ACGAGGATCG AGAGCATGTG GGAATCGAAG CAGAGGATGC TGAAAGCCCG CGGAATCAAG GGGAGAGAAG GATTTAAAGA AGAGGAAAAG GACCTTGTTC TGCATGAAGT GGTTGCTATG TTGGGTTATG GAGGAGAAGG AGATGGATGG GGACTGGTGA GTAAAGCATC GGACTTGATG GTTCGAGCCA AAGGGAACTT GTTTTCGAGG GGTTTGTCTG AGTTCAACGA ATGGGAAGTC AACATTCCCA CAAAGGGTTT TCTTACAGCG CTCAATGATC ATCTCTTAAT GCGTCTCCCA CCACATCACT GCACAAGGTT CATGCTTCCT GAGACTGCTG GGATTATACC CAATGAGGTC GAGTGCACCG AGTGCCGTAG AACCATGGAA AAGTATTACT TGTACCAATG CTGCCTTGAG TAAGATCCCA GAATATTGGG AACCAAGTAG GGTATTTGGA AGCCATCAGC TTGTTCCAAT ACAACCAAAT AAGTTTGCGT CTTTTTTTTT TTCTCTTTGT TGTGAATTTC TCTACTCTTC TTCATATTGT TGTTGTTCTG CTCTACTAAA GCAGAGTCTT TGTAATAAAA AAAATTTGTG TGTTTGAGAT TTCGAAA
Length2717
Protein Sequence
Protein Residue
Map Locationscaffold_3: 142190.. 145404
Download Sequence
A.thaliana
AGI-codeAT3G01670.1
Description
TAIR curator summary
Alias[AtSEOR2][SEOa][SEOR2][Arabidopsis thaliana sieve element occlusion-related 2][sieve element occlusion a][sieve element occlusion-related 2]
Gene coexpression
MR
MR Locus Description
1 Ahg477347
6 Ahg933864 beta glucosidase 33
14.0712 Ahg494762 Glycosyl hydrolase family 17 protein
15.3297 Ahg482086
17.4929 Ahg491408 homeobox gene 8
20.4939 Ahg950891 Protein kinase superfamily protein
23.0217 Ahg493691 sucrose synthase 5
24.5357 Ahg470465 glycine-rich protein
24.8596 Ahg905564 Leucine-rich repeat (LRR) family protein
28.2843 Ahg483236 autoinhibited Ca(2+)-ATPase, isoform 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression