Detail



ID : Ahg477362

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477362|fgenesh2_kg.3__63__AT3G01540.2
Sequence
TCTAACTTTC TCTCTCTTAC TGCTCTACGC TTCTTCTTCT TCTTGTGGCG TAGATTTTTA TAGAGAGAGA AAGCTCGAGT TCAGAGGATT TGACCCGAGA CTTTAATCTA ATCTGCTTTT CGTTTTCCAC ATTCAGGTAC GCGTCTATTA TCTGCAGAAG TCTTTATTTG CTATGGCTGC TACCGCCGCT GCTCCTTCTG TTGTCCGTTA TGCACCTGAG GATCATTCTC TTCCCAAGCC CTGGAAAGGC CTTGTCGATG ATAGAACTGG TTACTTGTAC TTTTGGAATC CTGAGACCAA TGTTACTCAG TACGAGAAAC CTACCGCTGC TCAGCCTCCC AAGTTTCCCG CCGTTTCTCT TAGCTCTTCC GTTCAGGTTC AACAAACTGA TGCCTATGCT CCTGCCAAGG ATGACAATAA GTACCCCAGA GGCACTGAAC ATGGGCCTAA GATTGAGTCT GCCTCGAGGT TCACCGAGGG TGGCAGAAGT GGACCGCCAT ATTCAAACGG TGCTGCTAAT GGAGTTGGGA ATTCTGCTTA TGGTCCAGCA TCTGCCAGAG GTCCTCCTCG CTCATCAGCT CCAGGAAATG AACTGTCCCC TGAGGCCTAT TCCCGCCGTC ATGAAATTAC TGTCAGTGGG GGCCAAGTAC CACCACCTCT AATGTCCTTT GAAGCTACTG GTTTTCCTTC TGAGCTTCTG CGGGAGGTAC TCAATGCAGG TTTCTCTGCT CCTACTCCGA TTCAAGCTCA GTCATGGCCA ATTGCGATGC AAGGGAGGGA CATAGTTGCC ATTGCTAAAA CTGGCTCGGG AAAAACTTTG GGTTACTTGA TTCCTGGATT TCTGCATCTT CAACGCATCC GAAATGATTC GCGAATGGGC CCAACAATCT TGGTATTGTC TCCAACGAGG GAGCTGGCCA CACAAATCCA AGAAGAAGCT GTTAAATTTG GGAGGTCATC AAGAATTTCG TGCACGTGTT TGTATGGTGG TGCACCAAAG GGCCCTCAGC TGAGGGATTT AGAAAGAGGA GCAGATATCG TGGTTGCAAC TCCTGGGCGA TTGAATGATA TCCTTGAAAT GAGGAGGATA AGTCTGCGTC AAATATCTTA TCTTGTGCTA GATGAGGCAG ATCGAATGTT GGACATGGGT TTTGAACCAC AGATAAGGAA GATTGTGAAA GAAATTCCCA CGAAGCGTCA AACCCTTATG TACACAGCTA CATGGCCAAA GGGAGTTAGG AAAATTGCAG CTGACTTACT TGTTAACCCT GCTCAAGTCA ACATTGGGAA TGTTGACGAG CTTGTGGCTA ACAAGTCAAT AACACAGCAT ATTGAAGTGG TAGCACCAAT GGAGAAACAG AGGAGGTTAG AGCAGATCTT GCGGTCTCAG GAACCAGGCT CGAAGGTGAT AATATTCTGC TCAACCAAAA GGATGTGTGA TCAACTAACC CGCAATCTAA CCCGCCAATT TGGAGCTGCT GCTATACATG GGGACAAGTC ACAGCCTGAG AGAGACAATG TTCTTAATCA ATTCCGCAGT GGCAGGACTC CGGTTCTTGT AGCAACTGAT GTTGCTGCTC GTGGGCTGGA TGTTAAGGAC ATCAGGGCTG TCGTAAATTA TGATTTCCCC AATGGAGTGG AAGACTATGT TCATAGAATA GGAAGAACAG GAAGAGCTGG AGCGACTGGT CAGGCATTCA CATTCTTTGG TGATCAAGAT TCGAAGCATG CTTCGGATCT GATCAAGATT TTGGAAGGAG CAAACCAGCG AGTTCCTCCT CAGATCCGCG AAATGGCTAC CCGTGGTGGT GGTGGAATGA ACAAATTCAG TCGTTGGGGT CCTCCTTCCG GAGGCCGTGG TCGTGGTGGC GACTCTGGTT ATGGTGGCAG AGGTAGCTTT GTTTCGCGTG ACAGTAGAAG CAGTAATGGA TGGGGAAGAG AGCGTGAAAG AAGCCGTAGC CCCGAGAGAT TTAACAGAGC TCCACCACCG TCTTCCACCG GATCTCCTCC TCGCAGCTTC CACGAGACGA TGATGATGAA ACACAGATGA AAAGAGAGAC ACAAAGCTGA TAAAGCCAAG TGACGATATT TTTTTTGGCC GATGAAAAAC TTTTAAAAAA AAAAACAGGA CCAAGAAGAC ATTCCCTCCC ATTGGAAACT TACGTTCAAA ACTACAATTG ATATCTTACG GTTTGTATTT CATCTCAGAG ATTGGTAAGA ATGTTTTATT AGATGGGATT CTCTAGCATT TAAATTAAAT ATCAAAGTGG T 
Length2271
Protein Sequence
Protein Residue
Map Locationscaffold_3: 180587.. 184648
Download Sequence
A.thaliana
AGI-codeAT3G01540.2
DescriptionDEAD box RNA helicase 1
TAIR curator summaryRNA HELICASE DRH1
Alias[ATDRH1][DRH1][ARABIDOPSIS THALIANA DEAD BOX RNA HELICASE 1][DEAD box RNA helicase 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg476207 Protein of unknown function DUF2359, transmembrane
1.73205 Ahg470110 SIGNAL PEPTIDE PEPTIDASE-LIKE 4
1.73205 Ahg478733 evolutionarily conserved C-terminal region 2
2.23607 Ahg949638 nucleotide binding protein 35
6.32456 Ahg476734
6.78233 Ahg477608 beta glucosidase 25
9.05539 Ahg473860 S-ribonuclease binding protein 1
11.3137 Ahg481452 KH domain-containing protein
11.8322 Ahg481921 ubiquitin-activating enzyme 1
12.6491 Ahg483978 B-box type zinc finger protein with CCT domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression