Detail



ID : Ahg470110

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470110|fgenesh2_kg.1__64__AT1G01650.1
Sequence
TTTTTTTTCC CTCTTCTCTC TTTCTCTCTC TTGTTCCTTG TACCTTCCTG CATTTTTTTC TCCATCTTTC CTCTCTAATC TTTTTATCTT CTTCTTCTTC TCCCCTCCTT TTAACGATTC TGTGGAGAGT GTATCAGTTA TGATCTTGTG GAAATCTCTC AGCTGTTTCT CGTTCGTCTT CGGCTTGTTG TTGTACAGTG CTAGTTTCGT TTCTGCTGGA GACATAGTTC ACCACGACGA TTCGCTTCCC CAGAGACCTG GTTGCAACAA CAATTTCGTA CTGGTGAAAG TCCCAACTCG AGTTAATGGG TCCGAATACA CGGAGTTTGT TGGTGTTGGT GCTAGGTTTG GCCCAACCTT GGAATCTAAG GAGAAACGTG CTACCCTCAT CAAACTTGCT ATTGCAGACC CTCCTGATTG TTGCAGCACT CCCAAAAATA AGCTTACAGG AGAGGTCATT CTTGTTCATC GTGGTAAATG CAGTTTTACC GCTAAAACAA AGGTTGCTGA AGCAGCTGGT GCCTCCGCCA TCCTTATCAT AAACAACAGT ACAGATCTTT TCAAGATGGT CTGCGAGAAG GGTGAAAACG TTTTAGACAT AACTATTCCT GTTGTTATGC TACCCGTTGA TGCTGGTAGA AGTCTGGAGG ACATAGTCAA AAGTAACTCT ATAGTTACTT TGCAGCTCTA CTCACCGAAA CGTCCAGCAG TTGATGTGGC TGAGGTCTTT CTCTGGCTTA TGGCTGTCGG TACCATTTTA TGTGCTTCTT ATTGGTCTGC GTGGACTGTC AGGGAAGAAG CTATTGAGCA AGACAAGCTG CTAAAGGACG GATCAGATGA ACTTTTGCAG TTATCAACCA CCAGCTCTAG AGGTGTTGTT GAGGTCACCG TGATATCAGC AATTTTGTTT GTAGTGGTTG CTTCTTGTTT CCTGATCATG CTCTACAAGC TTATGTCATT CTGGTTTATA GAGGTGTTGG TGGTACTCTT TTGCATAGGT GGCGTAGAGG GGCTGCAAAC CTGTTTGGTC GCCTTACTCT CATGTTTCAG ATGGTTCCGC CGCTTTGGAG AATCATATCT CAAAGTTCCT ATCCTGGGTG CTGTCTCATA CTTGACTCTG GCTATATGTC CCTTTTGCAT AGCATTTGCT GTATTTTGGG CAGTTAAACG CCAATACTCT TATGCTTGGA TAGGGCAAGA TATACTTGGA ATCTCACTGA TAATCACGGT TCTTCAAATT GTCCGCGTAC CAAATCTTAA GGTCGGGTTT GTTCTTCTCA GCTGTGCCTT CATGTATGAC ATCTTCTGGG TTTTTGTTTC AAAATGGTGG TTCCGTGAAA GCGTGATGAT TGTGGTAGCC CGTGGTGACA GAAGCGGAGA GGACGGAATT CCAATGCTAC TAAAGATCCC ACGAATGTTT GATCCTTGGG GTGGCTACAG CATAATTGGA TTTGGTGACA TCATCTTACC AGGACTGCTT GTAACTTTCG CACTGAGGTA CGACTGGCTG GCGAACAAGA GGCTAAAGTC AGGATACTTC CTTGGGACAA TGTCTGCTTA TGGTCTAGGT CTTCTCATAA CATACATAGC TCTAAACTTG ATGGACGGAC ATGGACAACC GGCTCTGCTT TACATCGTCC CATTCATACT CGGTACTTTG TTCGTGTTGG GTCACAAGAG AGGTGACCTG AAGACGCTGT GGACAACAGG GGAACCCGAC AGGCCATGCC CTCACGTTCG TCTTCAACCT CAATCGTCTT AAAACAAGCT ACTATGTATC AGATGAGAAC AGATCAAAAT CAGATGATCC TCTAGTTTTT TTTATTGTTA ATACAACACA CCCCTTCTTA GGTCTATATA TATATGTCTC TGTACGCTTT CACACAACTA GACAGGAGAG CCCATACCAC ATTTGCCTTA ATAACTCTTT TAACCTCTCT TGCTAGTTGG CTTCTTTTCC TGAGTCATGA TGATCAGATT TTCTTCTATG ATATACATAT GTCCAA 
Length2006
Protein Sequence
Protein Residue
Map Locationscaffold_1: 223072.. 228034
Download Sequence
A.thaliana
AGI-codeAT1G01650.1
DescriptionSIGNAL PEPTIDE PEPTIDASE-LIKE 4
TAIR curator summary
Alias[ATSPPL4][SPPL4][ARABIDOPSIS THALIANA SIGNAL PEPTIDE PEPTIDASE-LIKE 4][SIGNAL PEPTIDE PEPTIDASE-LIKE 4]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg477362 DEAD box RNA helicase 1
6.7082 Ahg480424 Tetratricopeptide repeat (TPR)-like superfamily protein
9.79796 Ahg932042 ER lumen protein retaining receptor family protein
10 Ahg496629 splicing factor, putative
10.3923 Ahg492460 NIN like protein 7
13.1149 Ahg493153 SCARECROW-like 13
17.1464 Ahg480309 ARM repeat superfamily protein
17.3205 Ahg486981 prenylated RAB acceptor 1.A1
19.4936 Ahg488829 Telomerase activating protein Est1
19.799 Ahg495726 Pyruvate kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression