| Annotation |
|---|
| Description | jgi|Araly1|477411|fgenesh2_kg.3__112__AT3G01180.1 |
| Sequence |
TTTTTCTCGC TACTCTCCGA CAAAGCCTTC GTCTTTGGAT CAGGATGAAA TTTGTGGGAG TTTGTTTGTG ATCTGCTCTG CTCATAAAAT TCAATTGAGG CAAATTCGTC GAATCAAGTA AATGGCATCA GTTGCCGAGA GCTCTTTTCC TCTTCTGTGT CAAATCAAGA CTCAGCGTCG CGTCGTCACT TCGTCTACGC TGAGGAATTC GAGTCTTGTC CGAGTTTCTT ACCCTGAATT GCCTTCTGGG TCGCTCTCAT TTCGTTGTCG GAGCTTTGTT TACGGACATC GATGGAAGTG TGCGAGGCGC GTGGAGGCTA CGGGCTCAGA TTCTTCTGAA TCTGCGAGTG GAGGAGATGA GCCAGAGGAT GCCCTTCAGG CTACCATTGA GAAGAGCAAG AAGGTTCTTG CTATGCAAAG GAACCTTCTT CAGCAGATTG CTGAAAGGAG GAAGCTGGTC TCATCTATTA AAGAGAGCAC ACCTAACTTG GATGATGGAA AAGATTCTTC CAAAGAAGAG TATGGTTCTT CTGTGAATGC AAATACTGAT GCAACTAAAA AAGAAAAGAT GGATGGAGAT GTAAACCGTA GTGTTAGCCC AAGCAGTTAT GGCAAGTCAC CTTTAAACAA AGAACCAGAA GCTAAGAGTT TTTCTCCCAG TACTGAATCC CTGAATAAAA GCAAACAAAG CTCAGCGTCT GTGACCTCTC CTCAGAAACC ATCCGATGTA GCCGCGAATG GGAAGCCTTG GTCTAGCGTA GTAGCCTCCA GTCTAGATCC TCCTTACAAA CCATCTTCTG TTGTAACCTC TCCTGAGAAA ACTTCTCCTG AAAAGCCAAG TCAATCTCGC GCTGGTGCAT TTTGGTCAGA CCCACTACCG TCTTACCTGA CTAAAGCTCC TGAAACATCA AGTATGAGGA CAGAGGAGTA CGTGGAAACA AGAGAGGAAA AAACACCTGA AGTAGCTAGT AGTGAAACTA ACGAACCTGA GAAGGATGAA GAGAAGCCGC CTCCACTGGC TGGAGCAAAT GTCATGAATG TGATATTGGT AGCAGCAGAA TGTGCTCCAT TTTCGAAAAC AGGTGGCCTT GGAGATGTAG CTGGTGCTTT GCCAAAGGCT TTGGCTCGGC GTGGACATAG GGTTATGGTT GTGGTTCCTC GATATGCCGA GTATGCCGAA GCCAAAGATT TAGGGGTACG GAAGAGATAT AAGGTGGCTG GGCAGGATAT GGAAGTAATG TACTTCCATG CATATATAGA TGGTGTGGAT TTTGTTTTCA TTGATAGCCC AGTATTCCGG CATCTGAGTA ATAACATTTA CGGTGGAAAC CGACTTGATA TCTTGAAGCG GATGGTTTTA TTTTGCAAGG CTGCTGTTGA GGTTCCGTGG TATGTTCCTT GTGGAGGTGT GTGTTATGGT GATGGAAATT TGGCTTTTAT AGCAAATGAT TGGCACACTG CGTTACTACC AGTTTACCTG AAAGCCTATT ACCGAGATCA CGGAATAATG AAATACACAC GATCTGTTCT TGTAATTCAT AACATTGCTC ATCAGGGTCG AGGACCGGTA GATGATTTCT CCTACGTGGA TTTACCGAAC CATTACTTGG ATAGCTTCAA GTTATATGAC CCGGTAGGTG GTGAGCACTT CAACATCTTC GCAGCTGGTC TAAAAGCTGC GGATAGAGTT CTCACTGTTA GCCATGGATA TTCCTGGGAG GTTAAGACCT TAGAAGGAGG TTGGGGTCTG CATAACATCA TAAATGAAAA CGACTGGAAA TTTAGAGGAA TTGTGAACGG TATTGATACA CAAGAATGGA ACCCAAAATA TGATACTTTC TTGCACTCTG ATGATTATAC CAACTATTCC TTGGAGAATC TTCACATTGG TAAACCCCAA TGTAAAGCTG CATTACAGAA AGAGCTCGGT TTACCTATTC GGCCTGATGT TCCCCTGATC GGTTTTATTG GAAGATTGGA TCACCAGAAA GGTGTTGATT TGATAGCTGA GGCGGTTCCA TGGATGATGA GTCAGGATGT TCAGCTGGTT ATGTTAGGCT CAGGGCGACC GGATCTTGAA GAGGTCCTCA GACAAATGGA GCATCAATAC CGAGATAAAG CACGGGGATG GGTTGGGTTC TCAGTGAAAA CAGCACACAG AATAACAGCT GGTGCAGACA TATTGCTGAT GCCTTCGAGA TTTGAGCCGT GCGGTCTGAA CCAGCTTTAC GCAATGAACT ACGGAACCAT TCCAGTGGTC CATGCTGTGG GAGGATTGAG GGATACAGTT CAACAGTTTG ACCCCTATAG TGAAACGGGT CTTGGTTGGA CATTTGATAG CGCAGAAGCA GGTAAGTTGA TTCATGCCTT AGGAAACTGT TTGTTGACAT ATAGAGAGTA TAAGGAGAGT TGGGAAGGGC TTCAGAGAAG AGGAATGACA CAAGATTTGA GCTGGGATAA TGCTGCAGAG AAGTACGAAG AAGTTCTTGT TGCTGCTAAG TATCATTGGT GAAGTTCCTT TTTTTTTACT GTCTATAAAG AACCTGTCTT TGGAATTGTT AAGAAGCTTA GTTGTGTAGA TTTGGTGATA AAACTACATT GGAGCTTGGC AATTTCTCAT GCCATTTAAG CTCCTTGTGG TAAAGGGTCA AGCTTGTTAA TCTCTTGCTC TCTCTCTATA GTAATTCTAA AGTGATA |
| Length | 2697 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 337186.. 340597 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G01180.1 |
| Description | starch synthase 2 |
| TAIR curator summary | |
| Alias | [AtSS2][SS2][starch synthase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.78233 |
Ahg476200 | TIFY domain/Divergent CCT motif family protein |
| 8.7178 |
Ahg488487 | O-acyltransferase (WSD1-like) family protein |
| 12.6095 |
Ahg889207 | HAD superfamily, subfamily IIIB acid phosphatase |
| 15.0997 |
Ahg489781 | Arginase/deacetylase superfamily protein |
| 19.7484 |
Ahg496878 | Protein of unknown function (DUF579) |
| 22.3159 |
Ahg313253 | cellulose synthase-like A10 |
| 22.4944 |
Ahg477961 | O-acetyltransferase family protein |
| 23.9792 |
Ahg946577 | cellulose synthase-like A01 |
| 23.9792 |
Ahg479865 | MATE efflux family protein |
| 24.7386 |
Ahg324952 | Protein of unknown function (DUF1012) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|