Detail


ID : Ahg477418

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477418|fgenesh2_kg.3__119__AT3G01100.1
Sequence
GCAATGGAAA AATCGAGAAA AATGGTATCG TGTCGCTTTA AGGACTTATT TATGTATATG GCCAGAGAGC TCAAACGAAG ATCACCGCCT CGACTGATTC GTCGTTTCTC TTGATTCTTG GCAGACTTCT CTTGGTCTAA CTGAATTTAG AGTTATGCTT CTGTCAGCAC TTTTAACTTC AGTGGGAATC AATCTTGGCC TCTGTTTTCT CTTCTTCACT TTGTATTCAA TATTGAGAAA GCAGCCTAGC AATGTCACTG TATACGGTCC ACGGCTTGTT AAAGACGGCA AATCTCAGCA GTCAAATGAG TTCAACCTCG AGAGGCTTTT GCCTACTGCT GGTTGGGTCA AAAGAGCATT GGAACCTACC AATGATGAAA TTCTCTCCAA TCTTGGCTTA GATGCTTTGG TCTTCATTCG TGTCTTTGTC TTCAGTATAC GAGTGTTTAG CTTTGCTTCT GTGGTTGGGA TCTTTATACT TCTTCCTGTG AATTATATGG GCACCGAGTT TGAGGAGTTT TTCGACCTGC CAAAGAAGTC TATGGATAAC TTCAGTATTT CTAATGTTAA CGATGGATCA AATAAGCTGT GGATCCACTT TTGCGCAATA TACATCTTCA CGGCAGTTGT TTGCTCTCTA CTTTACTATG AGCACAAGTA CATTTTAACA AAGCGGATTG CTCATCTTTA TTCATCCAAG CCTCAGCCAC AAGAATTTAC AGTTCTGGTC AGTGGCGTCC CTCTTGTATC TGGGAACACT ATTAGTGAGA CAGTAGAAAA CTTTTTCAGG GAATATCATT CTTCCTCGTA TCTTTCTCAT ATAGTTGTTC ATCGGACAGA CAAGTTAAAA GTTCTCATGA ATGATGCTGA GAAGCTGTAC AAGAAGCTTA CACGAGCAAA ATCCGGAAGC ATATCTCGCC AGAATTCTAG GCGGGTTGGG TTTTTAGGGA TGTTTGGGAA TAATGTTGAC CATTACCAAA AGAAGCTTGA GAAGTTAGAA GATGACATGA GATTGAAACA GTCTTTATTA GCAGGAGAGG AAGTTCCAGC GGCTTTTGTT TCCTTTAGGA CAAGACATGG TGCTGCAATA GCAACAAACA TTCAGCAAGG AATAGATCCA ACACAATGGC TAACTGAGGC AGCCCCGGAG CCCAAAGATG TTCATTGGCC ATTTTTCACT GCATCGTTTG TGAGAAGATG GATCTCCAAT GTAGTGGTGC TCGTGGCTTT CGTAGCTCTT TTAATCCTAT ACATTGTCCC TGTTGTATTG GTTCAAGGTC TTGCTAATCT TCACCAGTTA GAGACTTGGT TCCCTTTTCT AAAAGGCATA TTAAATATGA AAATCGTGAG TCAAGTGATT ACGGGATATC TTCCGAGTCT AATTTTCCAG CTTTTCCTTC TTATAGTACC ACCTATTATG CTTCTACTTT CCTCAATGCA AGGATTCATT TCTCATAGCC AGATCGAGAA ATCGGCATGT ATCAAGCTTC TAATCTTTAC CGTATGGAAC AGTTTCTTTG CAAATGTACT GTCCGGATCT GCTCTTTATC GTGTTAATGT GTTCCTTGAA CCTAAGACTA TTCCTCGTGT GCTTGCTGCA GCTGTGCCAG CACAGGCATC GTTCTTTGTA TCTTATGTTG TGACCTCTGG ATGGACTGGT TTATCATCAG AGATCCTCCG TTTGGTTCCT CTTCTTTGGA GTTTTATAAC AAAACTTTTC GGCAAGGAAG ATGACAAAGA ATTTGAGGTT CCTCCAACTC CTTTCTGCCA AGAAATCCCA AAGGTTCTAT TTTTTGGACT TCTCGGTATA ACTTACTTCT TCCTTTCGCC ATTGATACTG CCGTTCTTGT TGGTCTACTA TTGTCTTGGA TATGTCATCT ACCGCAACCA GCTCCTAAAC GTATATGCGG CCAAGTATGA AACTGGTGGA AAGTTTTGGC CAATAGTACA CAGCTACACT ATCTTCTCTT TGGTACTAAT GCACATTATT GCAGTCGGAT TATTTGGGCT TAAAAAGCTT CCAGTGGCAT CTTCTTTAAC AATTCCCCTT CCGATTCTGA CCGTCCTTTT CAGCATTTAC TGCCAAAGAC GGTTTTTACC AAATTTCAAA TCTTATCCTA CCCAGTGCCT AGTAAACAAA GACAAAGCAG ACGAGAGAGA GCAAAACATG TCTGAATTCT ATTCGGAACT GGTTGTTGCT TACCGAGATC CTGCACTTCC GGCATCACAG AACTCACGAG ACATCTCACC TTAAGATCAC CTTTTTACTT GAGCTTTTGA AGTTTGCTTA TGTTGATTGA AGCGGTTAGC TTTACTATAC CTGGTTCAAT ACATGAAAGA ACACACTAAA CCGGTTGTCT TGTACATTGG GTCTTAACCG AGAATCAACC GGTTTTTGTG CTTGTGTAAA AAAAAAGGAA AGAGTTTATG TCAGTGTTTC TCTAAACCGG TTTAAGACGG TACAAACCTT TTGAAAGTTG CCAAAACAAA ACGTAATGAT TTAAAGTAAA AACAGAGAAT ATTTAGC
Length2527
Protein Sequence
Protein Residue
Map Locationscaffold_3: 367358.. 371446
Download Sequence
A.thaliana
AGI-codeAT3G01100.1
Descriptionhypothetical protein 1
TAIR curator summaryunknown protein, has cDNAs and ESTs associated to it
Alias[ATHYP1][HYP1][ARABIDOPSIS THALIANA HYPOTHETICAL PROTEIN 1][hypothetical protein 1]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg926152 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
8.7178 Ahg470730 Thioredoxin superfamily protein
12.2066 Ahg947767 Disease resistance protein (TIR-NBS-LRR class) family
15.1987 Ahg923463 FTSH protease 1
19.5959 Ahg945359
21.2132 Ahg901830 hydroxyproline-rich glycoprotein family protein
21.2132 Ahg333392 hydroxyproline-rich glycoprotein family protein
27.1293 Ahg472381 SCARECROW-like 1
27.2764 Ahg928240 Serinc-domain containing serine and sphingolipid biosynthesis protein
28.6182 Ahg482837 AMP deaminase, putative / myoadenylate deaminase, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression