| Annotation |
|---|
| Description | jgi|Araly1|482837|fgenesh2_kg.4__1897__AT2G38280.2 |
| Sequence |
GCCACTAAAA CGAAATCGTG GTCTTACTCT CTCTTCTGAC CTGAGCTCAC ACACAGATTT TGATTGTGTC TGTCACTCAT GGAACCCAAT ATTTACCAAC TTGCCCTCGC GGCTCTCTTT GGAGCTTCCT TCGTTGCTGT TTCTGGGTTT TTCATGCATT TCAAGGCACT GAATCTAGTC CTTGAGCGTG GTAAGGAGCG TAAAGAGAAC CCTGAAGGAG ACGAGCCTCA AAATCCGACC TTGGTGAGAC GGCGGAGCCA AGTTAGAAGG AAGGGTATTG ACCAATACGG TCGCAGTCCT GCTTCTCTTC CAGATGCCAC TCCTTTTACC GATGGCGGCG GTGGTGATAC AGGTCGGAGC AACGGTCACG TTTATGTCGA TGAAATCCCT CCTGGTCTCC CGAGGCTTCA TACGCCATCT GAGGGGAGAG CTTCAGTACA TGGAGCTAGT AGTATCAGGA AAACTGGAAG CTTTGTTAGA CCAATCTCTC CGAAATCCCC TGTTGCTAGT GCTAGTGCTT TTGAGAGTGT GGAAGAATCA GATGATGATG ATAATTTGAC TAATAGTGAG GGTTTAGATG CTTCCTACTT GCAAGCTAAT GGTGACAATG AATTGGTGAA GCCTGTAGAT GCCAATGAAG AGCAAATATC TATGGTTGCT TCAAGTATGA TTCGATCACA CAGTGTGTCT GGTGACTTAC ATGGAGTTCA GCCTGATCCT ATTGCCGCTG ATATTCTTCG TAAGGAGCCA GAGCAAGAGA CCTTTGTCCG TCTTAATGTT CCTCTTGAGG TGCCAACGTC CGATGAAGTT GAAGCCTATA AATGTCTGCA AGAATGTCTT GAACTGCGGA AGAGGTATGT CTTCCAAGAA ACAGTTGCGC CATGGGAAAA AGAAGTCATA TCTGATCCTA GTACTCCAAA GCCTAATACA GAGCCATTTG CACACTATCC TCAGGGAAAA ACTGATCATT ATTTTGAGAT GCAAGATGGG GTAGTCCACG TGTTTGCAAA TAAAGATGCA AAAGAAGAGC TCTTCCCGGT AGCTGATGCC ACAGCGTTTT TCACTGACTT GCATCATGTA CTCAAAGTCA TAGCTGCAGG AAACATCCGG ACTTTGTGCC ACCGTCGACT AGTGCTCCTA GAACAGAAAT TCAATCTCCA TTTGATGCTT AATGCGGATA AAGAATTTCT TGCTCAAAAA AGTGCACCAC ATCGTGATTT TTATAACGTT AGGAAAGTCG ACACTCATGT TCATCACTCA GCTTGCATGA ACCAGAAACA CCTTTTAAGG TTTATCAAGT CAAAGCTCCG GAAAGAACCC GATGAGGTTG TAATATTCCG AGATGGGACA TATTTGACCT TGAAAGAAGT TTTTGAGAGC CTGGATCTGA CTGGATATGA CCTGAACGTC GACCTTTTGG ATGTTCATGC AGACAAAAGT ACCTTTCATC GTTTTGATAA GTTTAACCTT AAGTATAATC CTTGTGGTCA AAGTAGGCTT AGGGAGATTT TCCTTAAACA GGATAATCTC ATCCAAGGTC GATTTCTTGG TGAGATAACA AAGCAAGTCT TCTCTGACCT TGAAGCTAGT AAATATCAGA TGGCCGAATA CAGAATATCT ATATATGGCA GAAAAATGAG CGAGTGGGAC CAACTGGCTA GTTGGATTGT GAACAATGAT CTATACAGCG AGAATGTTGT CTGGTTAATT CAGCTCCCAC GCTTGTACAA CATTTACAAG GACATGGGTA TTGTGACATC TTTCCAGAAT ATCCTTGACA ATATTTTCAT TCCTCTGTTT GAAGCCACGA TAGATCCCGA TTCCCATCCC CAGCTCCATG TTTTTTTGAA GCAGGTTGTT GGATTTGATT TGGTTGATGA TGAAAGCAAA CCTGAAAGAC GGCCCACAAA ACATATGCCC ACTCCAGCTC AATGGACTAA CGCGTTCAAT CCTGCATTTT CATACTATGT CTACTATTGT TATGCTAACC TCTATGTGCT AAATAAGCTT CGGGAGTCAA AGGGCATGAC TACCATCACG CTACGGCCAC ATTCTGGAGA GGCTGGTGAC ATTGACCACT TGGCTGCTAC GTTTCTCACA TGCCATAGCA TCGCACATGG AATCAATCTG CGGAAGTCTC CTGTGCTTCA GTATCTCTAC TACCTCGCCC AGATTGGTCT GGCCATGTCT CCACTGAGCA ACAACTCTTT GTTTCTAGAT TACCACCGAA ACCCGTTTCC TGTGTTTTTC TTGAGAGGTC TCAATGTTTC CCTGTCTACG GATGATCCCC TTCAGATTCA CTTAACTAAA GAACCTCTCG TGGAAGAGTA TAGCATAGCT GCCTCAGTTT GGAAGCTGAG TGCGTGTGAC CTGTGCGAGA TAGCTCGTAA CTCAGTGTAC CAGTCAGGTT TCTCACATGC CCTGAAGTCG CACTGGATTG GAAAAGACTA CTACAAAAGA GGACCTGATG GAAACGATAT TCACAAAACA AATGTGCCTC ACATAAGGGT GGAGTTCCGG GACACGATTT GGAAAGAGGA GATGCAACAG GTTTATCTGG GCAAGGCTGT TATCTCAGAT GAAGTTGTTC CGTAAAAACC GCAATCAGAA ATGGCAACGT TTAAGAATCC AACATATTTC AGGAGAACAA AGAGAGCAAG CAGCTAGAGA AGTATACGAA GCAGGAACCT AGTAGATAGG GTAATAATAT GAGTGGCTCT GTGCCCTGAG AAAGCGATTT GGCTGTCAAT CATATTGTCT TATAAAGCTT TTTAGATAAA GAGAGATACA AAGAGACTAG TTGAGAACCG GTTTTAATAT AATGGATTTC AGTTTTT |
| Length | 2837 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 17570936.. 17593093 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G38280.1 |
| Description | AMP deaminase, putative / myoadenylate deaminase, putative |
| TAIR curator summary | Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage. |
| Alias | [ATAMPD][FAC1][ADENOSINE 5'-MONOPHOSPHATE DEAMINASE][EMBRYONIC FACTOR1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg480236 | SH3 domain-containing protein |
| 2 |
Ahg480601 | ubiquitin family protein |
| 2.23607 |
Ahg940649 | |
| 2.64575 |
Ahg481429 | Protein kinase family protein |
| 2.82843 |
Ahg909539 | |
| 2.82843 |
Ahg947537 | crooked neck protein, putative / cell cycle protein, putative |
| 3.4641 |
Ahg478791 | Root hair defective 3 GTP-binding protein (RHD3) |
| 3.87298 |
Ahg470391 | Transducin family protein / WD-40 repeat family protein |
| 4.24264 |
Ahg319762 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
| 5.83095 |
Ahg488188 | IKI3 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|