Detail



ID : Ahg477445

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477445|fgenesh2_kg.3__146__AT3G02150.2
Sequence
AATTTTCTTT TTCTTTTTTT TGAAAAGAAA AATCGAATCA CATACTTTCT TCTCTCTTAT TTCTCATTCT TCTTCTTCAT CATATTACTC ACTTTATAGA ACAGCAAAAC CCTAGATTTG CTGTTCAAGC TCAAGACCGT ACAAACTTTG GAGCTCTAGA TATAAAGATC TCGAGTATAG GCATTATGAA TATCGTCTCT TGGAAAGATG CAAACGACGA AGTTTCAGGC GGCGCTACCA CAAGACGTGA AGGAGAAGTA GAAGAAGATC AAGAAGAAGC CCAAGTCAGA GCCACCAGTG GCAAAACCGT AATTAAAAAG CCACCAACCT CGATCTCTTC CTCTTCTTCT TCTTCGTCGT GGATGAAATC GAAGGATCCA AGGATTGTTA GGGTTTCACG CGCCTTTGGA GGCAAAGACC GTCACAGCAA AGTGTGTACG TTACGTGGGT TACGTGACAG ACGCGTGAGA TTATCAGTCC CAACGGCCAT TCAGCTCTAC GATCTTCAAG AACGGCTCGG TGTTGACCAG CCTAGCAAAG CCGTTGACTG GTTGCTTGAT GCAGCTAAAG AGGAGATCGA CGAGCTCCCT CCGTTACCTA TCTCGCCGGA AAATTTCAGC ATCTTCAACC ATCATCACTC CTTCTTGAAT CTTGGTCAAA GGCCGGGTCA AGATCCGACC CAACTCGGGT TCAAAATCAA TGGATGTGTA GAAGAGTCTA CTACTACTAG CCGTGAAGCA AACAATAAAG AGAAAGGAGA AAACGATGTC GTTTTCGCAA ACAATCATCA TGTTGGGTCT TATGGAACTT ATCACAACAT GGAACATCAT CATCATCATC ACCAACATTT GAGTTTACAG GCGGATTATC ATAATCATCA ACATCAACTA CATAGTCTTG TCCCATTTCC ATCACAAATT TTGGTATGTC CAATGACGAC ATCAACAACA GCAACTATAC AATCTTTGTT TCCATCATCG TCGTCAGCTG GTTCAGGAAC TATGGAGACA TTAGATCCGA GGCAAATGGT GAGCCATTTT CAAATGCCAA TAATGGGTAA TTCTTCATCT TCGTCATCCC AAAACATTTC CACATTATAT TCATTGTTAC ATGGTAGTAA TAGCAACAAT GGTGGTAGAG ACATCAATAA TCGGATGTCG TCGGTCCAAT TCAACCGAGC TAATAGCACT ACAACGGCTA ATATGTCGAG GCATTTAGGC TCGGAGAGTA GTACAAGTAG AGGAAGTGAT CACCATATGT GA 
Length1262
Protein Sequence
Protein Residue
Map Locationscaffold_3: 445016.. 446528
Download Sequence
A.thaliana
AGI-codeAT3G02150.2
Descriptionplastid transcription factor 1
TAIR curator summarya chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.
Alias[PTF1][TCP13][TFPD][plastid transcription factor 1][TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 13]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg491759 Ypt/Rab-GAP domain of gyp1p superfamily protein
7.28011 Ahg937805 phytosulfokine 4 precursor
12.6886 Ahg934591 SCAR homolog 2
15.1987 Ahg926342 trehalose-6-phosphatase synthase S8
15.9687 Ahg471206 alpha/beta-Hydrolases superfamily protein
19.799 Ahg480005 Helicase/SANT-associated, DNA binding protein
23.9583 Ahg918756 UDP-D-glucuronate 4-epimerase 2
27.4591 Ahg936422 YELLOW STRIPE like 6
29.2575 Ahg928623 exocyst subunit exo70 family protein H4
29.3428 Ahg929255 Nodulin MtN3 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression