| Annotation |
|---|
| Description | jgi|Araly1|480005|fgenesh2_kg.3__2706__AT3G24880.1 |
| Sequence |
ATGCATGGAA GCGTTTCAGG ATATCTTCTA GTAAATGCTG AGGTTGATTC CATGGGAGGA GTTATTGATA GTGGAGGTGG TATTGGTGTC AAAACTTCTC CGCGCCGAAC AGCAATTGAG AAGGCTCAAG CGGAGCTAAG GCAAGAGTAT GATGTCCGTG AGGAAAGGAG GAGAGAACTG GAGTTTCTGG AAAAAGGCGG TAATCCCTTG GATTTCAAGT TCGGTATTGC AACTTCACAT AGCGTCCAAT CTACATCACT CACAGATCAG CAAGCAGAGC ATTTTATAAA CAGTGAAGTC AAGGATAGTT TTGCCCTGAC TGCCTCACCA CATGGAGACT CTGTGGAGAG TAGCGGTAGA CCTGGAGTTC CTACAATTTC TGAACCTAAT ACAGCAGATA ATCTTTTACT GTTTGATTCT GAAAACAAGT CAGTTGAAGG AGAAAGAAAT TTGAGATATC CTAATAGGCA AAACAGAACT TCTGACTCAG AACGATCTTC CAAAGCAAAC ACCAACCAGA ATACCAAAGA AACAGAAGAT TCTGCCATCT TTCGCCCGTA TGCTCGGAGG AACAGATCAA AGATAAATCG GGATCCAGCG CGGTCAAGCT CTACAGATTT AGTTCAGAAT CGTGGTGGTC TTGCAACATC TATATCCATT CGCAGAGGAT CAGTAGAAGG AGAGGGTTGC ATTCCTGAAG CAGCCAATCA AAAGGATAGG CATACAACTT CTGTATCTTG TCCAATATTT GCAAATACAA ATGGTAATAA CGTTCCAAAA AATAGAGTTC CCAGCAATTC TCTGAATACT AAGGTGGATG GTGAACCTGT TGTACGAGAG AGTACTGCTG GATCCAAGAC TAGTCTATTT AAAGATGAAG CCGACATTAC ATATAGAAAA AGGTCTGCAT ATTTGCCAGT TGGAGAGTCT GGCCTTGCTG GGGAGAAGGC ACAGCTAGTT TCGAGTGGTA CAGAGATTGG TTCTCCCAAA GCTGCAACAA TAGCTAGGCA GGAAAATAAT TCTACCCAAC TGAATGGCCT AAGAGATTCC ATGGGAGAGG AAGAAAGCTT AACAAATAGA GGAGCTGCAG GGACTAAAGG GATAGAGTCA GAGTCTTCTC ATGCTAACAA CGTAGAAGTA GATGTAGATA ATGAAAGAGA TCTTTATAAA GTGGAGAAAC TTGACTCTGA TGAAATCTCT ATGCAGAAGA CTTTGAGAGT AGAGGGGTTA CTAGATCAAA CAGTTGGTGA AATAACGCAA ACTAAGATTG AAGATGAGAC AGGTCAATCT ACCACCATTA TTACTGAGTG CATTCCTGAG CGTGAAATGC AGATGAAATC GGTTAAAATT GAAAATCAAA GTCACAGAAG TACAGCTGAG ATGCAAAATG AGGAGAAAGG TTTTGAGACT GAGAAAAGGC TTCAAGATGG GTTGGTTGTA CCCGAAAATG ACAGGAAAGT TGGTAGTATT TTACCTGAAA ATCCTAGCAG CTCGTTGTGC TCGGGAATTC CTCAGGCATC TGTAGACACA AGTTCTTGCA CAGTTGGCAA TAATTTATTG TCAGGAACTG ATATTGAATC ACTAAAACAT CAGCCGAGCT CAGATGCAGT TGTGTTAGAT ACTATCAAGG AGGACTCTAT CCTTGAAGAG GCACGGATTA TACAGGCAAA GAGAAAAAGA ATTGCCGAGT TATCTTTTGG TACTGCACCA TTGGAGGTCC GTGAGAAATC TCAATGGGAT TTTGTCCTCG AAGAAATGGC ATGGCTGGCA AATGATTTTG CGCAGGAGCG CCTTTGGAAG ATGACTGCTG CAGCACAAAT TTGCCATCGA GTTGCTTTGA CTTGTCAGTT GAGATTTGAG GAACGAAATC AGCACAAAAA GCTGAAAAAA ATAGCTTCAG TCCTATCTAA TGCTATCTTA GAATTCTGGA GTTCTGTGGA GGTTCCTGGG GAGCTGGAGG AGACGAGCTT GGGTATTGTT AAGGAGACTT GCCAAGAATC TAATTGTGTG AATGGCAGAG TATGTTTGGC TGGGGGTGTC AAGGAGTATG CAAGTAGATT TTTGAAGTAC AACAACTCTT CCATCTCCTA TCATTCAGCT GCACTGTCAA CACCGGACAA TATGTGCAAC CCAGAAATAT TGGATATATC TATGGTTGAT CAGCTTACAG AAGCAAGCCT CTTTTATTCA GTTCCATCTG GTGCAATGGA GGTGTACCAT AAGTCCATTG AGTCGCATCT TACACGCTGT GAGAAGTCTG GAAGTAGCAT GCAGGAGGAG GTTGATACAT CAGCCTATGA TACTGCTGGA GGATATAATG GTACTGCGTT CGATGAGGAT GAAGGAGAAA CAAGTACCTA TTATCTTCCA GGAGCTTTCG AGTCTAGCAG ATCATTTAAT ATAAGCCACA AAAAAAGGAA GAATCTGATG AAGTCTCATT CTGCCCGGTC ATATGATCTT GGGGATGATT TACCATATGT CAACTACACA GGTGGCTCTA ACTCATCAAG TTTGATGGCA AAAAGGCCTG CCAGTAATAT TAATGCCGGC TCAGTTCCGA CGAGGCGAGT GCGCACTGCT TCCAGGCAGA GGATTGTGAG TCCTTTTGGG TGTGCTACTG CTGGGAATTT ACCAGTGCCC TCGAAGACAG ATGCGTCTAG TGGGGATACT AGTTCTTTCC AGGATGAGCA AAGTAGTTTG CATGGTGGAT CGGCAGTCCA AAAAGGCACA GAGGTTGAGT CAAGTGGTAA TTTTGAAAAG ATGTTACCTT ATGACATGGC TGAAACCTCA GGAAAACCTA AAAAGAAGAA GAAGACTCAT CAGGGATCCG CATATGACCA AACCTGGCAT CTCGATCCGT CAGTCCATGT TGAACAGAAG GACCACTGGA AGAAGCGACC AGAGAATCAT TTCGATATGA ATGGCCTGTA TGGTCCTCAT AGTGCAAAGA AGCAAAAGAC CACCAAGCAA TTGGTAGACA ATAATTTTGA TATTGCTATT CCTCACGCTG GATCGATTCC TTCTCCGGCA GCTTCCCAGA TGAGCAATAT GTCCAACCCC AACAAATCTA TCAAATTTAT TGGAGGTCGT GATAGGGCCA GAAAAATAAA AGGCCTGAAG ATTTCTCCTG GTCAGCATGG TTCTGGAAAT CCGTGGTCAC TATTTGAGGA TCAGGCGCTT GTTGTCCTAG TGCATGACAT GGGCCCTAAC TGGGAGCTCA TTAGTGATGC TATGAACAGC ACCCTTAAAA TTAAGTGTAT ATATCGCAAT CCGACTGAGT GCAAGGAGCG GCATAAGATT CTGATGGATA AGACTGCTGG TGATGGGGCT GATAGTGCTG AAGATTCAGG GAATTCCCAG TCTTATCCAT CCACTTTGCC TGGCATCCCA AAGGGAAGTG CGAGACAGTT GTTTCAACGA CTGCAAGGGC CAATGGAGGA AGATACCCTG AAGTCTCATT TTGAGAAGAT TTGTTTGATT GGGAAGAAGT TACATTATAG AAAGACACAG AATCAAGGAG ATGAAATGAT GGGTGATGGT AGTCCAAATT TTAAGAGTGT TATCAGAGTT TCTGTGGTTT CTTTTGTTCA CGGAATTCAG TTTTCAAGTT GCACTGGAGC TGGCATATCT CAATCACCTG ACATACCAGG TTTGCATGTT TCTAAGTATA GCTGCAAATC TTGGCTAACA TTTGCTGAAA ATGATGGTCG GGATCCCAAG CAAATAGTAC CAGTTCACAA TTCACAAGTT ATGGCTCTTT CTCAAGTATT CCCGAATAAT CTGAATGGAG GTGTTCTTAC GCCCCTTGAT GTCTGTGATG CATCAACTTC AGGTCAAGAT GTATTTTCAC TTGAAAATCC AGGTCTTCCA ATTTTGAATC AGGGAACGCC AGTGCTCCAT ACTTCTGGAG CACATCCATC CACTCCTGGA TCGTCTGGTG TGGTTCTGAG TAACAATTTG CCAACCACAT CTGGCCTACA GAGTGCTTCT GTCAGGGATG GTAGATTCAA TGTTCCTAGA GGGTCTTTGC CACTTGATGA ACAACACCGA CTACAACAAT TTAATCAGAT GTTATCCGGT AGAAACCTAC AGCAGCCCTC CTTATCAACT CCTGGAGCTG TCTCAGGATC TGATCGTGGA CATCGCATGG TTCCTGGTGG AAATGCTATG GGTGTAACTG GAATGAACAG GAACACACCC ATGTCAAGGC CTGGTTTCCA AGGGATGGCC TCATCAGCAA TGCCAAATAC TGGTAGTATG CTTTCTTCTG GTATGGTAGG AATTCCAAAC ACTGGAAATG TTCATTCCGG AGGAGGAGCT TCTCAAGGAA ACTCCATGCT CAGGCCTCGT GAAGCTGTGC AGCATATGAT GCGGATGCAA GCTGCTCAAG GGAACAGTCC GGGGATCCCA GCTTTCAGTA ATTTGAGTTC TGGATTTACC AACCAGACAA CTCCTGTTCA GGCATACCCA GGCCAACTTT CCCAGCAGCA TCAGATGTCA CCGCAGTCAC ATGTGCTTGG CAACTCGCAT CATCCTCATC TCCAGAGCCC AAGTCAAGCC ACTGGGGCAC AGCAGGAAGC ATTTGCTATC CGTCAAAGGC AAATACACCA GAGGTATTTG CAGCAACAGC AGCAGCAGTT TCCAGCATCT GGTACTATGA TGCCACATGT ACAACAACCT CAGGGCTCGT CTGTTTCTTC TTCTCCACAA AACAGTCCTC AGACTCAACC ACCTGTTTCG CCCCAGCCAT TATCGATGCC CCCAGTGTCG CCCTCTCCTA ATATTAATGC TATGGCACAA CAGAACCCTA AAAAATCTCA GTTGCCGCTT CATGGTCTGG GTAGGAGTCC TCAGTCTGGT ACTTCTGGAG TGAACAATCA AGCTGGAAAA CAACGGCAGC GACAACTTCA GCAGCAGTTG CAGCAGTCTG CAAGACAACA TCCACACCAG CGGCAGCCAA CACAAGGTCA ACAGCAGAAT AAAAAGGGGA TGGGTAGAGG CAGCATGATC CATCAGAACA TCACTGTCGA TCAGTCACAC CTGAATGGTC TTACCATGGC CCCAGGAAAT CAGGCTACCG AAAAAGGAGA GTCAGCGGTT CCAGTTAGGC CTGATCAGCA GTCTAGTGCA GGGACTAGCA CGAGCACACA TCTGCAGTCT AAACCATTTG TTCCTCCCTT ATCTTCAAAT CATTCACAGC AACTGCCAAA CTCATTCCCT GGTGCTTCGT CTCCGTCCCA ACAACAGATG CAATTACATT CAGACAATAG CATCCAAGGC CAGACCTCAC CTGCGGCCCC ATGTAACATC TTATCCACCT CTAGCCCGTC AATTACACCT GCAGTTGCAC CTTCCAACCA TCAGCATTTG TTGATACACC AAAAGCAGCG CAATCAAGTG CAATCAGCAG CTCAGCGAGT TGTTCATCAT AATCATCTAG GAAACTCTGA GTTATCAAAG AAGTCCCAAG CTGAACGTAT GCCACGTGTT CCGCTGTCTG TCACCAATAC AACCCAAACT GCTAGTATGG GTACGACCAA GGGTATGCAT CAAGCGAGTA ATGATTTGAA AAACATAAAA GCAGTTGGTT CTACTGCGGC GCCTGCTTTG GAACCTCCAT CTTGTGTTGC CTCTGTGCAA AGCACTGCTT CTAAAGTAGT AAACAGTTCC AATACAGATT CAGCTGGGAA TGATCCAGTA ACAACACCGA ACCAAGGACT AGCTCAGGAG CATCTATCTG GTGACTTGCC TAGTCACGGG ATCAAGGGCG TGACACAGAG ACAACAACAG TCTCTACCTT CAGAAGAAAA GAGACCAAAG TTGCCAGAGA AGCTGACTGT ACAAAATCAA AAACACCTTG CTTCTGAGCA GCAACAGCAG CCTCAATTAG AAGAAGCACT GGAAGTATCA TCTTCCAAGC CTCCTGATAC AAAAGTGGAA TGAGAGGCAT GACAGATGAA CCTAGAACCT TGAGTAGTTG TAGATCCTGC AAAGCTTAAT GCTGGCCCTT ACCAACAACA ACCCTGTACA GGAACCCAAA CTGGTTTATC TCCTCCGCCT TCAGATTCGG GTCCTCACTT TTTGGCATTA ACATCTTGGC TGAGATGCTG TATAACATAA CAAACTCTAC AGATTGTGG |
| Length | 6139 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 11531706.. 11541031 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G24880.1 |
| Description | Helicase/SANT-associated, DNA binding protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 2.23607 |
Ahg470464 | RING/U-box superfamily protein |
| 3 |
Ahg895977 | RNA polymerase II transcription mediators |
| 6.245 |
Ahg486870 | Auxin efflux carrier family protein |
| 6.9282 |
Ahg476236 | Cupredoxin superfamily protein |
| 7.93725 |
Ahg934591 | SCAR homolog 2 |
| 8 |
Ahg949673 | DEAD-box protein abstrakt, putative |
| 8.24621 |
Ahg480636 | ribonuclease II family protein |
| 9.16515 |
Ahg927732 | Pentatricopeptide repeat (PPR) superfamily protein |
| 10.3923 |
Ahg491448 | Sec23/Sec24 protein transport family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|