Detail



ID : Ahg477449

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477449|fgenesh2_kg.3__150__AT3G02180.1
Sequence
TTCCATCTGT TTCTCTTCCT TGATTTGCGG CCAATCGTAG AACAAGAAGT AGTGAGCAGA AGATACACTA CAGAGACAGA GAGAGATCTT GACAAGATGG GTAAAGCAAG AGGAGTGAAC AATGGTGTTA ATGAAAGTTC TCTCGGTTAT CTCTTTGGTT CCGGCCAGCC TTCTTCCGCT GCTGCTGCCA CAATGGGGAC TACTACTACA ACAACCACCA CAACTACCAC CGACGGAACC GGAGGGAGAC CGATAACCAC CACGACGACC ACAGTCACTG ATAACAAGAA GACATCTGCA GGTGTTAGAG GAAGTCCTAA TAATTACTTC AGGTCAGAAG GCCAAAACTG TGGAAACTTT CTCACGGACA GGCCATCTAC TAAGGTTCAT GCAGCTCCTG GTGGTGGATC TTCTCTTGAT TATCTGTTTG GAGGACCAAG TCCTGCTGGA TCTGGAAACA AATGAAGTTA CTTGTAGTTT TTTCCCCACT ATTCAGATTT GTGTAAATCA TCAAATGTGT GGCTTTTATA TCCCTTTGTG AACCATGTGT GATTCAATTG TGATGTTTGC CTTT 
Length574
Protein Sequence
Protein Residue
Map Locationscaffold_3: 459035.. 459841
Download Sequence
A.thaliana
AGI-codeAT3G02180.1
DescriptionSPIRAL1-like3
TAIR curator summarySPIRAL1-LIKE3 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.
Alias[SP1L3][SPIRAL1-like3]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg475745 pfkB-like carbohydrate kinase family protein
4 Ahg495608 microtubule-associated proteins 65-1
6.7082 Ahg485401 CDPK-related kinase
8.66025 Ahg495023 xylulose kinase-2
9.48683 Ahg934986 S-formylglutathione hydrolase
10.247 Ahg327857 Kinesin motor family protein
10.3923 Ahg493567 RNA binding (RRM/RBD/RNP motifs) family protein
14.4914 Ahg486380 Protein kinase superfamily protein
22.9783 Ahg478170 Leucine-rich repeat protein kinase family protein
31.1127 Ahg481399 TPX2 (targeting protein for Xklp2) protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression