Detail



ID : Ahg485401

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485401|fgenesh2_kg.5__1393__AT3G50530.1
Sequence
TAATTAAAAA GCGAACGTAT CGTCGTTTCT CTTTTTAACT CATTCTCTTT GGATCCAAAT CTTTCGCTTT GGAATTCGCC ATTGACAAAG GAGACACTTC CAAAACAAAG AATAAGCAAA ATTTATAAAA ATTCAGTTTT TATTTTTGCA AGATTCAAAA GTTTGAATTT TTACTTGTGG GTTTTTGATT TCGATAATGA TACAATTCAG ATTTTGATTC GTGTGATGTT GAGAGAGATT CGTAATGGGT CTCTGTACTT CGAAACCGAA TTCACCTAAT TCCGATCAAA TTCCGGCGAG GAATAGTCCA CTTCCGGCGT CGGAATCCGT CAAGCCTTCA AGCTCTAATG AAGATCAGTG TGTAACAACG AACAATGAGG GAAAAAAGTC TCCGTTTTTC CCTTTTTATA GTCCGAGTCC AGCTCACTAT TTCTTCTCCA AGAAGACTCC GGCGAGATCT CCGGCGACTA ATTCGACTAA TTCGACTCCG AAGCGATTCT TTAAACGACC GTTTCCTCCT CCGTCTCCGG CGAAACACAT CAGAGCTGTT TTAGCGAGAA GGCATGGCTC TGTGAAGCCT AATTCTGCGG CGATCCCTGA AGGTAGTGAA GCTGAAGGAG GTGGTGTTGG ATTGGATAAA AGCTTTGGTT TTTCCAAGAG CTTTGCGAGT AAGTATGAGC TTGGTGATGA AGTTGGTCGT GGTCATTTTG GATATACTTG TGCTGCTAAG TTTAAGAAAG GTGATAATAA AGGACAACAA GTCGCTGTTA AAGTTATCCC CAAAGCAAAG ATGACGACGG CTATTGCAAT TGAAGATGTG AGGAGGGAAG TGAAGATATT GAGGGCTTTG TCTGGTCATA ACAATCTTCC TCATTTCTAT GATGCTTATG AGGATCATGA TAATGTCTAT ATAGTGATGG AGCTATGTGA AGGAGGAGAG CTTTTGGATA GAATACTTTC AAGAGGTGGG AAATACACAG AGGAGGATGC AAAGACTGTT ATGATACAAA TATTGAATGT GGTTGCCTTT TGTCATCTCC AAGGTGTTGT ACACAGAGAT CTTAAACCAG AGAATTTTCT CTTTACCTCA AAAGAAGACA CCTCTCAGTT AAAGGCAATA GATTTTGGTT TGTCGGATTA CGTGAGACCA GATGAGAGGC TCAATGACAT TGTTGGCAGT GCATACTATG TAGCACCTGA AGTTCTACAT AGATCTTACA GTACAGAAGC TGATATTTGG AGTGTTGGAG TGATTGTGTA TATTCTATTG TGTGGAAGCC GACCGTTTTG GGCTAGGACA GAATCAGGAA TATTTCGTGC TGTTCTAAAA GCAGATCCGA GTTTTGATGA CCCTCCTTGG CCTTTGTTAT CTTCAGAGGC AAGAGATTTT GTAAAGCGGT TGCTAAACAA AGACCCGCGT AAAAGATTAA CAGCTGCTCA AGCCTTAAGT CATCCATGGA TAAAAGACTC TAATAACGCA AACGTTCCAT TGGATATTCT GGTTTTCAAA CTTATGAGAG CTTATTTACG ATCATCATCT CTTCGTAAAG CTGCATTAAG GGCCTTGTCG AAAACACTTA CAGTGGATGA ATTGTTTTAT CTGAGGGAGC AGTTTGCGTT ACTAGAACCT AGTAAAAACG GAACCATAAG TCTAGAAAAC ATCAAATCAG CTCTGATGAA AATGGCAACA GATGCAATGA AGGATTCGCG TATTCCAGAA TTCTTAGCAC AACTGAGTGC TCTTCAATAT AGAAGAATGG ACTTTGAGGA ATTCTGTGCA GCGGCATTGA GTGTTCACCA GCTAGAAGCT CTTGATCGAT GGGAACAACA CGCTCGTTGT GCTTATGAGC TTTTCGAAAA GGAAGGAAAC CGACCTATCA TGATCGATGA ACTCGCTTCG GAACTTGGTC TTGGTCCTTC TGTACCGGTT CACGCAGTGC TTCACGATTG GCTTAGGCAT ACGGATGGGA AGCTTAGCTT TCTCGGATTT GTGAAATTGC TACATGGTGT GTCTAGCCGC ACGATCAAAG CTCATTAGAA GGGTTTTGAA ACTTGCAATG ATATGTATGA AATCTGTCTG AGGTCTCTTT TTGTTATGAA AGCTGAGAAG CAAAGATAAA AAAAAAAAAA AGAGTGTAGC AAAGAAAGAG AAGTGTGTTA GTTTTTGTAG AGAATGATGA TATTTTTCCA AACTTGGTAA CTTATGACGA TTGATGATGT TTCTGACATT TCTAGATTTT TTATTTTAAC ACCAATCTTA TTTTCCAATT TTTTT 
Length2275
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14315116.. 14318348
Download Sequence
A.thaliana
AGI-codeAT3G50530.2
DescriptionCDPK-related kinase
TAIR curator summaryCDPK-related kinase
Alias[CRK][CDPK-related kinase]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg484168 cullin-associated and neddylation dissociated
2.44949 Ahg944085 GRAS family transcription factor
2.82843 Ahg480231 cycloartenol synthase 1
3.74166 Ahg475859 PLAT/LH2 domain-containing lipoxygenase family protein
5.09902 Ahg345894 Protein kinase superfamily protein
6.7082 Ahg477449 SPIRAL1-like3
7.74597 Ahg496212 PDI-like 1-4
8.24621 Ahg479057 Pentatricopeptide repeat (PPR-like) superfamily protein
9.69536 Ahg483537 Peptidase family C54 protein
9.94987 Ahg471559 sec7 domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression