Detail



ID : Ahg477750

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477750|fgenesh2_kg.3__451__AT3G04810.2
Sequence
CCATCGAGAG CAAAATCTGT CGTTTTCCTC TGAGAGCAGG TCTCATGGCG AACCAGTTTC TTCATCTTCT TCTTTGTTTT CTTCCAATGC CTACTCTTCA CTACCGTTGC TGCTTCTCCG GAAACGATGC CGTTTTGTAG TTTCCTCCAG GAAATGCAGA AACTGTTTTC TCTCTCAACT TCCTTTTCTT CTTCTTCGTT TTCGTCTTCT AAATCTGCCG ATTTGAATCT CGCAACGACG CCGTTTTAGG TTTGTTCATT CTATAGACAA AGGAGGTGAA TTTTAGAGTT TGTCAATGGA GAATTACGAG GTTCTTGAGC AAATTGGAAA AGGTTCCTTT GGGTCAGCTC TTCTTGTGAG ACATAAACAT GAGAAGAAAC TATATGTTTT GAAGAAAATC CGGCTTGCTC GGCAGACTGG TAGGACTAGA AGATCTGCTC ATCAAGAGAT GGAGTTGATT TCAAAGATAC ATAATCCATT CATTGTGGAA TATAAAGATT CTTGGGTTGA AAAGGGATGC TATGTGTGCA TTATCATAGG CTATTGCAAA GGAGGAGACA TGGCGGAAGC GATAAAGAAA ACCAATGGCG TACACTTCAC TGAAGAGAAA CTCTGCAAAT GGCTTTTTTA GCTCTTAATG GCTCTTGAAT ACTTGCATGC CAATCACATT CTCCATCGCG ATGTCAAGTG TTCCAACATA TTTTTGACAA AGGATCAGGA TATACGCCTT GGCGATTTTG GACTTGCCAA AGTCTTAACA TCAGATGACC TCGCGTCTTC AGTGGTTGGA ACACCAAGCT ACATGTGCCC CGAGCTACTA GCCGATATAC CCTATGGGTC CAAGTCTGAT ATTTGGTCGC TTGGATGTTG TATGTATGAG ATGACGGCTC TGAAACCTGC TTTCAAAGCT TTTGACATGC AAGGACTAAT AAACAGGATT AACAGATCAA TCGTTCCCCC ACTTCCGGCG CAATATTCTG CTGCCTTCCG AGGTCTGGTC AAAAGTATGC TCCGGAAAAA TCCAGAACTT AGACCAAGTG CTGCTGAGCT TCTTAGACAA CCGCTGCTTC AACCTTATAT CCAGAAGATT CATTTGAAAG TGAATGATCC AGGAAGTAAT GTGTTACATG CCCAATGGCC AGAATCTGAA TCCGCCAGGA GAAACAGCTT TCCAGAGCAG AGAAGGCGTC CTGCTGGCAA AAGCCATAGC TTTGGCCCAA GCAGGTTTAG GGGTAACCAG GAAGATTCTG TTTCTTCCAT AAAAAAACCT GCGCCCGCAT ATCTGACTCG TGAAAGGCAA GTAGACTTGT CTACAGATGA AAGCGGTGAT GGAACGGTTG TTCGTAGAAC TTCAGAGGCT TCTAAGAGTT CTAGGTATGT TCCAGTGAGA GCTTCGGCCT CACCTGTGAG ACCGAGACAG CCTAGGAGTG ACCTTGGTCA ACTTCCTGTA TCATCACAGC TTAAAAACCA AAAACCAGCC GCTTTGATTC GTAGAGCCTC CATGCCTAGC TCAAGAAAAC CTGCAAAAGA AATCAAAGAC TCTCTGTACA TTTCGAAAAC CAGTTTTCTC CACCAGATAA ATTCTCCTGA TGTGTCAATG AACGCACCAA GAATTGACAA GATTGAGTTT CCGCTAGCGT CATACGAGGA AGAGCCTTTT GTTCCGGTTG TGCGTGGTAA GAAGAAGAAA GCGTCGTCTA GAGGTTCCTA CAGTCCACCT CCAGAGCCAC CACTAGACTG CTCAATCACA AAAGACAAAT TTACTCTTGA ATCAGGCCAA AACAGAGAAG GAGCGATTAT GAAGGCGGTG TATGAAGATG CATATCTGGA AGATAGGAGT GAATCATCTG ATCAGAATGC GACAGCTGGA GCATCAAGCA GGGCTTCGTC GGGTGTAAGG AGACAAAGAT TTGATCCTAG CTCTTATCAG CAACGGGCTG AGGCACTGGA GGGATTGCTT GAATTCAGTG CAAGGTTGCT TCAAGATGAG AGGTACGATG AGCTCAATGT TTTATTGAGA CCCTTTGGTC CAGGGAAAGT CTCACCCAGA GAAACAGCGA TTTGGTTGTC CAAGAGCTTC AAGGAAACTA CTACTAATAA GCTGGAAGAT TGAGAGACGG ATTTCTAATT CTAACCTATT GTGACGTGAA AATTTTCCAC CTTTTAACAG TTTTTTAATC AGTCAAGAAA ATTGTATTAA AGTTAACTAC CTAGGTTGTC TTCTTTAATG AGTAGCTGAC CCTCTGTGTC TGATACATTG AAATTCAAGA AAAAACTTGG CCGGTTACCA AAAT 
Length2294
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1590205.. 1594281
Download Sequence
A.thaliana
AGI-codeAT3G04810.1
DescriptionNIMA-related kinase 2
TAIR curator summaryEncodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.
Alias[ATNEK2][NEK2][NIMA-related kinase 2]
Gene coexpression
MR
MR Locus Description
34.1321 Ahg935246 Ribosomal L38e protein family
40.7922 Ahg481704 ABC-2 type transporter family protein
47.1169 Ahg935233 Radical SAM superfamily protein
60.6795 Ahg935752 alpha/beta-Hydrolases superfamily protein
61.0737 Ahg484589 Leucine-rich receptor-like protein kinase family protein
69.1303 Ahg484564 carbamoyl phosphate synthetase A
73.8377 Ahg495356 plastidic pyruvate kinase beta subunit 1
77.923 Ahg473931 Glutamyl/glutaminyl-tRNA synthetase, class Ic
78.943 Ahg906113 PRLI-interacting factor, putative
81.4616 Ahg353309
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression