Detail



ID : Ahg484589

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484589|fgenesh2_kg.5__581__AT3G28040.1
Sequence
CAAAATGCCA TAACTCTCTC TTCCCTTATA CCAAAAATTA AGCTTTATCT CTCTATCCAT CAAGAGAGAG CATCAAAATG AGCGATAAGA GAAGAAACAT GATCTCATTT ACTCTGTTTC TCTCATTGAC AACGATGTTA TCACTCATCA ACGGCGATAT CGACTCAATC CAACTAAACG ACGACGTTTT AGGACTCATC GTCTTCAAAT CAGACCTCAA CGACCCATTT TCACACCTTC AATCATGGAA CGAAGACGAT AACACTCCTT GCTCATGGAG CTACGTCAAA TGCAACCCCA AAACATCTCG AGTCACCGAG CTTTCCCTCG ACGGTTTAGC CTTAACCGGA AAAATCAACC GCGGAATCCA AAAGCTTCAA CGTTTAAAAG TACTCTCACT TTCCAACAAC AACTTCACCG GAAACATCAA CGCTCTCTCA ACTAACAACA ATCTCCAAAA GCTAGATCTT AGCCACAACA ATCTCTCCGG TCAAATCCCG TCGTCTCTCG GTTCAATCAG CTCCTTGCAA CACCTTGACT TAACCGGAAA CTCTTTCTCC GGTACACTCT CTGATGATTT CTTCAACAAC TGTTCCTCTC TTAGATATCT GTCTCTGTCT CATAACCATC TTGAAGGTCA AATCCCAAGT ACTCTGTTTC AATGCTCTGT TTTGAACAGT CTTAATCTCT CAAGAAACCG TTTTTCGGGT AGTTTCGTCT CAGGATTCTG GAGACTTGAG AGGTTAAGAG CTTTAGATCT ATCTTCTAAT TCACTTTCTG GTTCAATACC TTTGGGGATA CTCTCTTTGC ATAACTTGAA AGAGTTGCAA TTACAGAGGA ATCAGTTCTC TGGATCATTG CCTTCAGATA TTGGACTCTG TCCTCATTTA AACAGAGTTG ATTTGAGTTT CAATCTTTTC TCTGGTGAAC TTCCAAGAAC TCTTCAGAAG CTGAGATCTT TGAACCACTT CGATTTATCG AAGAATTTGC TCTCCGGTGA TTTCCCGGCA TGGATTGGTG ATATGACTGG TTTAGTACAC TTGGATTTCT CCAGCAATGA GTTAACTGGG GAGCTTCCTT CTTTGATAGG TAACTTGAGA TCTTTAAAGG ATCTAATCTT GTCTGAGAAC AAACTCTCCG GCGAGATTCC GGAATCTTTG GAATCATGCA AAGGGCTTAT GGTTGTTCAG CTCAAAGGTA ATGGCTTCTC CGGTAGCATT CCTGATGGTT TGTTTGATCT TGCTCTTCAA GAAATGGATT TTTCGGGTAA CGGTTTTACC GGTTCGATCC CGAGAGGCTC AAGCAGGCTT TTTGAGTCAC TCAAAAGACT CGATCTTTCG CGCAACAATC TCACTGGAAG TATACCTGGT GAAATAGGGC TCTTCATCAA CATGAGATAC CTCAATTTGT CATGGAACCA TTTCAACACA AGAGTTCCTC CTGAAATCGA GTTTCTACAG AATTTAATAG TCTTGGATCT TAGGAACAGC GCGCTGATTG GTTCGGTTCC TGCTGATATA TGTGAGTCTC AGAGTCTGCA GATCCTTCAG TTGGATGGTA ACTCACTAAC TGGTTCTATA CCGGAAGGAA TCGGAAACTG CTCTTCTCTT AAATTGTTGA GTTTGTCTCA TAACAATCTT ACCGGTCCTA TTCCTAAATC TCTTTCAAAC TTACAAGAGC TCAAGATTCT AAAGCTAGAG GCCAATAAGC TTAGTGGAGA AATACCGAAA GAGCTCGGGG AATTACAGAA TCTGTTATTG GTTAACGTTT CGTTTAACCG ACTCATCGGA AGGTTACCAG TTGAAGGTGT GTTCCAAAGC TTAGACCAGA GTGCTATTCA AGGAAACCTA GGTATTTGTT CACCATTGTT GAGAGGACCA TGTACACTGA ATGTTCCAAA GCCTCTTGTC ATTGATCCAA ACTCCTACGG GCACGGGAAC AAAATGCCGG GAAACCGAGC AAGCAGTGGT TCTGGAAAGT TCCACCGCAG AATGTTCCTG AGTGTTTCAG TGATTGTAGC AATATCAGCC GCTATACTCA TCTTTTCCGG AGTCATAATT ATAACGTTGC TTAACGCGTC TGTGAGAAGA CGGCTTGCAT TTGTAGACAA CGCGTTGGAG AGCATTTTCT CGGGGTCTTC GAAATCAGGA AGAAGCTTAA TGATGGGTAA ACTTGTTCTG TTAAACTCAA GAACTTCACG TTCCTCGTCT TCGTCTCAAG AGTTCGAAAG AAACCCGGAT TCTCTTCTGA ACAAAGCTTC AAGAATTGGT GAAGGAGTTT TTGGAACAGT GTACAAGGCA CCTTTAGGAG AACAGGGGAG AAACTTGGCT GTTAAGAAAC TTGTCCGGTC GCCGATTCTT CAAAACCTAG AAGATTTTGA TCGCGAAGTT CGGATATTGG CGAAAGCGAA GCACCCTAAT CTAGTATCGA TCAAAGGGTA TTTCTGGACA CCGGAGTTGC ATCTTCTGGT ATCAGAATAC ATACCAAACG GAAACTTGCA GTCCAAGTTA CACGAACGAG AATCCTCAAC ACCGCCTCTT TCGTGGGACG TAAGATACAG AATCATCCTC GGTACGGCCA AAGGACTCGC TTATCTCCAC CATACATTCC GTCCAACAAC CATCCACTTC AACCTAAAGC CAACCAACAT CCTCCTCGAC GAGAAAAACA ACCCGAAAAT CTCCGATTTC GGGCTCTCTC GTCTCCTAAC AACACAAGAC GGGAACACAA TGAACAACAA CAGATTTCAA AACGCTTTAG GCTACGTAGC GCCTGAACTA GAGTGTCAGA ACTTAAGGGT CAACGAGAAA TGCGATGTTT ACGGGTTCGG GGTTTTGATA CTCGAACTTG TTACTGGTCG GAGACCTGTG GAGTACGGTG AAGACAGCTT TGTGATACTT AGCGACCATG TTCGAGTTAT GTTAGAACAA GGGAATGTGT TGGAGTGTAT TGATCCTGTG ATGGAGGAAC AATACTCTGA AGATGAGGTT TTGCCTGTCC TGAAACTTGC TCTTGTCTGT ACTTCACAAA TACCTTCGAA TCGGCCAACA ATGGCGGAGA TTGTTCAGAT CTTGCAAGTC ATCAATTCTC CTGTTCCTCA CCGGATCATG GATAGTTTCT AAAAATCTTT GTGTTAGTTA ATTTTTCATT AGTTTTTTTT TTTGCAATTT TTTCGTTGTC TTTGTCTTTT TTTTTTTTTT TTTTGGCTTT TGTGTAGAGA TTGCTTATTT CACAATGCTA CGCTTTCTCT TC 
Length3252
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4041735.. 4045043
Download Sequence
A.thaliana
AGI-codeAT3G28040.1
DescriptionLeucine-rich receptor-like protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.94987 Ahg478841 Subtilase family protein
14.9666 Ahg491249 Leucine-rich repeat protein kinase family protein
15.4272 Ahg478824 Tetratricopeptide repeat (TPR)-like superfamily protein
15.843 Ahg471076 Eukaryotic aspartyl protease family protein
16.1245 Ahg950866 plasmodesmata callose-binding protein 1
19.4936 Ahg479500 cell elongation protein / DWARF1 / DIMINUTO (DIM)
24.454 Ahg934049 Protein of unknown function, DUF642
26.0576 Ahg472169 microtubule-associated proteins 70-4
37.9473 Ahg947488 beta-1,3-glucanase_putative
39.3446 Ahg927399 Eukaryotic aspartyl protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression