| Annotation |
|---|
| Description | jgi|Araly1|477858|fgenesh2_kg.3__559__AT3G05670.1 |
| Sequence |
AATTTTGGCT CATTACCAAA AAAAAAGAAA AAAAAAGCTG TAAATAGAGA GGAAAATAAG GCGGGGAAAA GGATCACGAT TCACAAATTT AGTGGAAAAA TCAAAAGTGC TTCGTCTTCT TCATCGGAGA TCTGGTGCTC TGAATTGGAG AATTGAGGTT TGAGATTTGG TTAGGCTATA TAAATCTTTA GAGGAATCAT TGTTGTTTTG GTTGATGAGT TTAGGGGGTT TAGATTTAGA TTAGTGAGGA GCATATGGGA AAGAGAAACA CTTTTTGGGC AAGAAATTCT AATAGCAAGG TTAGATCTAA GGATAAGGGT TCTGATGAAT CTGATGAGGA TTATGTGATT TCCGACGAGG ATGAAGAAGA GTCTGAGGCT GATCTCAAGG AGGAGTATGC CTCATCCGTT GACGGTTTTG ATGGGTCTGA TGCAGTGGAA GCTGAGGAGT TAGATGAGGT GGAAGAGGAA GATGTGATGC TGAGGAATGT TGAGTGGCCA AAAGTGAAAA CTGGTCCTCG TGGTAACCGG AAAATCACGG GATGTAAGTC AAGAAAGATG AACCAAGTTG TGTCTGACAA CGAGGATGTG GATCTTGATG ATGCGGATGA TGAAGAGGAG GAGATAAGGA ATTCAAGGAA GGCTGTTGGA AAAGTTGGGT CTTTGGATGG AGAGAAACAC AGTAGAATAG GTTTAGGAAA GCGAAGGAGA GTTTTCTATG AGATAGAGGA TGAAGATGGA GACTATCCAG AGGAGGATGG CGAGGAAGAG GAAGAGAGGG ATGTGGAAAA TGTGGATTTA AATTCTTTGC ATGATGGTGA AGACGGGATG ATGGCATTGG AAGAGCAGGA CAATGTGTCA CACGAGACAG AAAAGGAAGA TGATGGAGAT TATGAGGATG AGGATGGCGA TGAAGATTTT ACCGCAGATG AAGATGTCTC ATTAGATGAG GAAGAGGAGG AAGAAACAAT TGCATGTAAC AAAAAGTCAC TGAAGGTTTG TAAGAAAAAC AAGCGAAAGC GAAGATCTGG AGAAGGTCGT AAAAGAAGGA AGAAATGCTC TGTTGCAAAA ACCCGTTTAA CGAGGGGAAG AAAGAGACGT GGGAAAAACA CAAACAGAGG AGTTGATGAA GATGATGATG ATTTTGTAGA TGACTGCCTA CCTGCAAGAA AGAAGGCGAA GACAAAGTCA TCAAGGCCAA GGCGTCGGCA TACCGTGCCA TCAGATTCAG ACATTGCATC CTCTGCAGAA TCCGATTATG AATACACAAT CTCGGAGGAG GAACGAGAGC AGATAATAGA AGCTGGTAGT TTGTTGAGAA GTAGTGTGAA GCATGCATCA TCTATAAGAC AAACCACAGT CAATAAGGAT TTGCCTCAGC TTCGTAAACC TCCTGTGAAG AAAGGTGAAA AGAAGGTAAA GCTAGTGAAA AGAGATGTGA TAAAAAACGT TTGTGGGATT TGTCTGTCTG AGGAAGACAT GCGGAGATTG AAGGGAACAT TGGACTGCTG TAGCCATTAC TTTTGTTTCA CTTGCATAAT GGAGTGGTCA AAAGTAGAAT CTCGCTGCCC GCTCTGCAAG CAGCGGTTCA GAACAATCAG TAAGCCTGCA AGATCTACAC CTGGAGTAGA TTTGAGAGAA GTTGTGATAC CGGTACCTGA ACGTGATCAG GTCTATCAAC CTACTGAAGA AGAGTTGAGG AGTTATCTTG ATCCCTATGA AAATATAATA TGCACTGAAT GTCACCAAGG TGATGATGAT GGGCTTATGT TGCTTTGTGA TCTTTGTGAT TCATCTGCCC ATACGTACTG TGTTGGTCTC GGGAGGGAAG TACCTGAAGG AAACTGGTAC TGTGAAGGTT GTAGACCCGT TGCACTTGGA TCAGCTAGTT CCCAAACGCA TAATACATCC GAGCAACAAA GGGTTAGTGG CTTTTACAGT AGACCATCAC CTCTTGTAGT TTCAGGGCAA TATCAAGATG CGTCTTTGCT AGTCTCCCCA CGTACACCAT TTTTCAATGG AGAGAACCTA TTTTCTCCAA GGCTTCCTAA TGGTGATGTT CAAGGTTCTT CTCCATCCGG CTTAGGGGCA ACCACATTAT CAAGTAGAAG GACGCTTCAC AGACACATAC AAAATATTAT CAACAGTGAT AGACTTATTA ATATGGGTGC TAGAACTGGT GGAACATCGA GTGATGGTTT TGTGACTACA CAAGTAGGTC ATGGCAGAAC AATCGACCCG TCTCAGCCTG CAGCGAGCCA AGCAACAGGT GTGTCATTGT ATACAATCTC TGAGGAAAGA CTACCCGACA ACAGTTCATT GATTTCTGCC CATAACCCTG AGCTTTTGTC TCCAAAGTTA GATGAATTTG GAAGCCAAGA AGCATTCAGA CGTTTGTCTA ATAATACATT TCTTGGTGAG CGGCCTATCG ATTTAGGATT ATGTCATGGG CTGGCTCAGG GTGATCCCTT GTTTGGTAAT CAACAACATC TTCACAGCTA CATGCCAAAC ATAATGTCTT CCATGGCAGG AGAACGACTG CCACAAAGAG TTAAAGCGCA TCTCAAAAAC TTGTCCAGTC AAATCGACTT AGGTCAAACC ACTTTCGACG AAATTTCCAC GTGCTCAATG CACACGATAC TGGCAGCTTG TGGACTTGAA CACGAGAGCA GTGAAGTCCA TCTTGTTCCG CCACCAGTGA CGTGTACTCA CCATCATATG ATACCTGGCA GCAGTAGTAG TAGTAGCGGC AGCAGCCTAA TGAAAGGGTG TTGCTATTCT TGTTTTGATT CATTTGTAGA AGATGTAGTT AAAATGATTC TAGACACAAG ACAACCCCAT TGGTTGAGGC TAGGGCTCCA CTAAAACCAC TTGCTTCAAT TGTTTATTAG ATTCGTTAGA AAATTGAATT T |
| Length | 2911 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 2067642.. 2071767 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G05670.1 |
| Description | RING/U-box protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg494432 | Leucine-rich repeat (LRR) family protein |
| 7.93725 |
Ahg488886 | PRLI-interacting factor, putative |
| 8.83176 |
Ahg898127 | |
| 9.8995 |
Ahg947205 | Nucleic acid-binding, OB-fold-like protein |
| 15.0997 |
Ahg330015 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
| 18.4391 |
Ahg350108 | |
| 24.8998 |
Ahg930999 | Ribosomal protein S12/S23 family protein |
| 28.5307 |
Ahg493193 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
| 28.8444 |
Ahg481908 | alternative NAD(P)H dehydrogenase 2 |
| 29.4788 |
Ahg488655 | microfibrillar-associated protein-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|