| Annotation |
|---|
| Description | jgi|Araly1|350108|fgenesh1_pg.C_scaffold_6000701 |
| Sequence |
ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCTTC TTCTTCTTCT TCAGCAGCAA AATACCCTCA CGAGGATTCT GGATCTTACC CTAAATCGCC GCATCAGCCT GTTACGCCAC CACCGGCTCA GGTTCATCAT CACCATCAAC AACAACCCCA TCAGCATCCC CAACCTCAAT CTCAACCTCA CCTCCACACG CTTCCTCATC CCCATTCTCA TTCTCACTCT CATTCACCAC TTGCTGCTGC TGCTGCTGCT GCTCCTTATG AGGTTGAACC TAGAACGGTG GTTAAGGTTG CGAGAAGTGA GCCTAGAGAT GGAGAGAGAC GCTCTCCTCT CCCTCTTGTC TATCGGTCTC CGTCCCTGCC CACTACTGTT TCTTCTAGTG ATCCTCATTT GACTCACGCC CCTGTGCCCA TGGAACCGAG AGATGGTACT AAGGATGGTA GGGAAATTAG GGTTGACAAC AGAGAAAGTA GGAGTGATGG AAGAGAGATT TATGGTGAGA CAAAGAGAGA GATTCAGGGT CCTAAGAGTG ACAGAGATGT GAAGTTTGAT AGATCAGTAG ACGACTTTAG CGGAAAAGGT AATACTGGAA GCTATACTAG GAATGATGGG AGTGAGATGT ATGGCGAGAC TAAGAGGGAG ATTCAGGGTC CTAAGAGTGA CAGGGATGCC AAGTTTGAGC GTCCAGGGGA TGATTTTAGC GGGAAAAGTA ATGCCGGTAG CTATACTAGG GATACCAAAT TTGATAGGGA GAATCAGAAT TATAATGAAC AAAAGGCGGA GATTAAGATG GAAAAGGACG GGCATGCTCA CTTGGCTTGG AAAGAGCAGA AGGATTACCA TAGAGGCAAG AGAGTTGCTG AAGGTTCCAC TGCAAATGTG GATCCGTGGG TTGCATCCCG TGGTAATCCG CAAGGCCCAA CTGAGGTTGG GCCTAAGGAT TTCTCCGCGC CTGTGGAGGG GCCCCAGTTA GAGGGACGTG AAACTGTCGG AGAAAACAAG GTTGATGCAA AAAACGAAGA TAGATTTAAG GACAAAGATA AGAAAAGAAA AGAGTTAAAG CATCGAGAAT GGGGGGACCG AGATAAGGAT AGAAATGACC GTCGAGGATC CGTGCTTATT GGTAGTGTCA TGAGTGAACC CAAAGAGATT GGAAGAGAAG AAAGAGAATC CGACAGGTGG GAACGGGAGA GGATGGAGCA GAAAGATCGA GAAAGGAATA AAGAGAAAGA TAAAGATCAT ATCAAAAGAG AGCCAAGGAC TGGTGCTGAG AAAGAGATCT CGCAGAATGA GAAAGAGTTG GGAGAAGCAT CTGCCAAACC ATCAGAGCAG GAATATGTGG CACCAGAGCA GAAGAAGCAG AACGAACCGG ATAATTGGGA AAAAGACGAA AGAGAATCAA AGGAAAAAAG GAGAGAGAGG GATGGAGCTA CTGAGAGGGA AAAGGATGCC TTCAATTATG GAGTTCAGCA GCGGAAGAGA GCGCTGAGAC CGAGAGGCAG CCCACAAACC ACAAACCGCG ACCATGTCCT CTCACGGAGT CAGGACAACG AAGGAGTACA AGGTAATCAT TCATTTATAT ATCCTCAAGA AAGGATGGAG TTGCACTGCT TGGAGAACAA TAGCAAGTCA GAGGTGTCGA TTGTTGTTTA CAAAGTTGGC GAATGTATGC AAGAACTGAT TAAATTGTGG AAAGAATATG ATTTGTCTCA TCCTGATAAA AGCGGTGATT TTGCAAATAA TGGCCCCACT CTTGAAGTTA GGATTCCAGC TGAGCATGTT ACTGCTACAA ATCGCCAAGT AAGAGGTGGC CAGCTATGGG GAACAGATAT ATACACAGAC GATTCCGATC TTGTTGCTGG TTACTGTCGT CCCACAGCTT CTCCTCCTCC ACCTACAATG CAAGAGCTGC GCACTACTAT TAGAGTCTTG CCGTCACAAG ATTACTACAC CTCCAAGCTA AGGAACAATG TCCGTTCTCG AGCATGGGGA GCTGGAATCG GATGCAGTTA CAGAGTTGAG CGGTGCTATA TACTGAAGAA AGGAGGTGGG ACTATTGAAC TGGAACCTTC TCTTACACAC TCCTCAACTG TGGAGCCAAC ACTTGCACCA ATGGCTGTTG AAAGATCTAT GACCACCAGG GCTGCAGCTT CAGAGGAAAA AAGGAGAGAG AGGGATGGTG ATTCAGAGGC AGAAAGAGCT GAAAAGCGTA GCAGAATCAG TGAAAAAGAA TCTGAAGATG GGTGTTTGGA GGGTGAAGGA GCTACAGAGA GGGAAAAGGA TGCCTTCAAC TATGGAGTTC AGCAGCGGAA GAGAGCGCTG AGACCGAGAG GCAGCCCACA AACCACGAAC CGCGAACATG TCCACTCACG GAGTCAGGAC AACGAAGGTG CCTTATCTCT TGAAATGTCT ATGCAGGTAA GAGGTGGCCA GCTATGGGGA ACCGATATAT ACACAGACGA TTCCGATCTT GTTGCTGGTT ACTGTCGTCC CACAGCTTCT CCTCCTCCAC CGACAATGCA AGAGTTGCGC ACTACTATTA GAGTCTTACC GTCACAGGAT TACTACACCT CCAAGCTAAG GAACAATGTC CGTTCTCGAG CATGGGGAGC TGGAATCGGA TGCAGTTACA GAGTTGAGCG GTGCTATATA CTGAAGAAAG GAGGTGGAAC TATTGAACTG GAGCCTTCTC TTACACACTC CTCAACTGTG GAGCCAACAC TCGCACCAAT GGCTATGACC ACTAGAGCTG CAGCTTCGAA TGCTCTGCGG CAACAAAGGA TCAAATATAG CATAAGCATT GTTGCTGATA AAGGTCTCAA GAAGCCACTT TTCACCTCTG CCCGCTTGAA GAAAGGAGAA GTTTTGTACT TAGAAACTCA TTCATGCAGG TATGAGCTCT GTTTCGCTGG AGAGAAAACC ATCAAAGCAA TCCAAGCCTC ACAACAACAA TCATCGCATG AAGCTATGGA GACGGATAAT AATAATAACA AGTCACAGAA CCATCTGACA AACGGTGACA AAACAGATTC AGACAACAGT TTAATCGATG TTTTCCGTTG GTCACGCTGT AAGAAACCTC TCCCGCAGAA GCTTATGCGG TCTATTGGGG TTCCACTCCC TGCAGATCAT ATCGAGGTGT TGGAGGAGAA TCTTGATTGG GAAGATGTAC AGTGGTCACA AACTGGTGTT TGGATTGCTG GAAAAGAGTA CACACTTGCT CGTGTTCATT TTCTCTCGCC CAACTAA |
| Length | 3267 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3192144.. 3275285 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G08450.1 |
| Description | |
| TAIR curator summary | |
| Alias | [HDC1][RXT3-like][Histone Deactylation Complex 1][RXT3-like] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg487210 | kow domain-containing transcription factor 1 |
| 4.47214 |
Ahg485414 | U1 small nuclear ribonucleoprotein-70K |
| 4.69042 |
Ahg942565 | F-BOX WITH WD-40 2 |
| 5.91608 |
Ahg323999 | Structural maintenance of chromosomes (SMC) family protein |
| 6.48074 |
Ahg892895 | Splicing factor, CC1-like |
| 6.85565 |
Ahg484067 | phytanoyl-CoA dioxygenase (PhyH) family protein |
| 7.48331 |
Ahg490965 | U2 snRNP auxilliary factor, large subunit, splicing factor |
| 7.48331 |
Ahg489687 | zinc finger (C2H2 type) family protein |
| 8.24621 |
Ahg330015 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
| 8.48528 |
Ahg471776 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|