Detail



ID : Ahg477944

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477944|fgenesh2_kg.3__645__AT3G06410.1
Sequence
ATTTTTTTTA GTTCAAAAAA GTTTCAGCTT TGAAGGCAGA GAGAGAGAGA GAGAGATCAA GCGACTGAGA GTGGTGTTGA AGCGAAACTA CGATCTTCTT TTTCTTTTCT TCTTTCTCAG ATTTTCACAA CACTCTTCTT TGATCGGAGC TCTAACATTC CGACAAAAGC TAAAAGACTT CCTCTTTAGC TGGTTTGAGG GATTTGTCTC CCTCTGTAGA GATTAGGGTC TATCAATGGA GCGGTACGGT CGCGCCGGTG AAGAAGGGTC GCGATCGGAT CCATCTCTTG AATGGACCTC TCATGGAGGT GAAACCGGAC TCGAAGCTTC GATGTGGCGG TTAGGGTTGA GCGGCGGCGG AGGAGAATCG TACCCGGAGC GACCCGACGA GCCTGATTGT ATTTATTACT TGAGAACCGG CGTTTGCGGG TACGGGTCAA GATGTCGGTT TAATCACCCA CGAGATCGTG GAGCGGTTAT TGGAGGTGTG AGAGGAGAAG CTGGAGCTTT ACCGGAGAGG ATGGGACATC CGGTTTGTCA GCATTTTATG CGGACGGGAA CGTGTAAATT TGGCGCTTCT TGCAAGTATC ATCATCCTAG GCAAGGAGGT GGTGGTGGTT CCGTTGCGCC TGTCTCGCTT AGTTATTTGG GATATCCATT ACGCCCGGGA GAGAAAGAGT GCTCTTATTA CTTGAGAACC GGTCAGTGTA AATTTGGTTT GACTTGTAGA TTCAACCATC CCGTGCCACT CGCTGTACAG GGTCCACCTC AGCATCAGCA ACAGCAACAG CCACAGCTAC AGACTATTTA TCCGACACTT CAGTCTCAAT CCGTTCCTTC CTCTCAACAA TATGGGTTAG TTTTGACAAG GCCATCTCTT TTACCTGGTT CATATCTTCC AAGCCCTTAC GGTCCTCCAA TGGTTCTGCC TCCGGGAATG GTTCCATACT CTGGTTGGAA TCCTTACCAG GCTTCTTTAA GTGCAATGCC TTCGCCTGGA ACTCAACCGT CTATTGGATC AAGCTCTGTT TATGGAATCA CGCCGTTATC TCCTTCAGTG ACTGCATATA CAGGAACATA TCAATCAGGC CCGTCTTCAA ATACCTCAAA AGAGTTTCCT CAGCGACCTG ATCAACCCGA GTGTCAATAC TTCATGAGAA CCGGTGACTG TAAATTCGGA TCCTCTTGCC GATACCATCA TCCTGTAGAT GCAGTTCCAC CTAAGACTGG CCTTGTCCTC AGCTCCATTG GCCTTCCACT TCGTCCCGGA GTAGCGCAAT GCACTCACTT TTCTCAACAC GGAATCTGCA AGTTTGGACC AGCGTGTAGG TTTGATCACT CAATGAGTTC TTCGCTTAGC TACAGTCCGT CTGCATCATC ACTAACCGAT ATGCCCGTGG CTCCATACCC AATCGGATCA TCCTCACTCA GCGGCTCATC AGCTCCAGTA AGCTCAAGCA ATGAACCCAC CACAGAGGCT GTGACTGCTG CTGCAGTTTC CACTTCTATG GTCAGTGGCT TGAGCCGTCC AGAGCCAGCT GAGACGAGTG GTGACTCGGC CAGCGTCAGT GGCAGCATAG AAGCTACGAC TTCAAGTTAA AAAAAAAAAA AAAAGAGAGA GGAAAATACC CTCAATTCTT CGTAAACTAA GCAACATTAA GTAAAAAGAA AAAAGAGAAA AGAAGATTAT TTTTGGGGTC TGAGATTCGA TGGAAGCAGA GAGACCAAAG CTTCTGTCAT TGACCATTTG TCCATAGATA ATATATTCTC TCATACGGCC ATCTCTCTAT CTCTCTCCCT CTTCTTTATT TTTCTTGAAT AACGATTACT AATAAATGGC CTTATTCAAG C 
Length1851
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2450678.. 2453274
Download Sequence
A.thaliana
AGI-codeAT3G06410.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg492523 Protein of unknown function (DUF604)
3.4641 Ahg483651 GRAS family transcription factor
3.74166 Ahg482608 Protein kinase superfamily protein
29.7993 Ahg335306 Small nuclear ribonucleoprotein family protein
31.6386 Ahg492851 Domain of unknown function (DUF23)
33.4365 Ahg480456 Protein of unknown function (DUF502)
33.8231 Ahg472217 Pseudouridine synthase/archaeosine transglycosylase-like family protein
38.2623 Ahg904413 phosphoesterase
38.5227 Ahg491117 tonoplast monosaccharide transporter2
44.2719 Ahg490734 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression