Detail



ID : Ahg480456

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480456|fgenesh2_kg.3__3157__AT2G20120.1
Sequence
TCAAGTTGGA GTTAGCTAGC TAGCTTGCTT TATGCACAGA AGAACAGTCG CCGGCAAAAG TCTCAACCTT TTTCCTCTCC GCCGTTCACA TTCACCTGCA TTTCTCCCTT CTTTCTTCTT CTCCGGCTAG ATTTCATTGT CGCCTGAGTT TCTCGGCGAT GGGAGACGAG AAGCCGGCGA TTGTGATGGC CAATCGTGAA AGAGATCGAG AGCTTCTGAT TCCCGTCGCT GATTCCGGCG ACAAAGACGA TGGTCCTTCT TCAAAGCCTT CTTCTTCTTC TTCCTCTTCT TCGCATCAAT CCAGCCACGA GACTTTTAGC TTGTTCATTA GGGGTTGGGC GTCAAAGAAG TTCATGACAG GCTGTGTTAT CCTACTTCCT ATTGCAATTA CTTTCTATAT AACATGGTGG TTTATTCACT TTGTTGATGG ATTCTTCTCT CCAATATATG CACAACTTGG AATCAACGTA TTTGGTTTCG GTTTTTTGAC TTCCATTGCA TTCATCTTCT TGGTCGGGGT GTTCATGTCT TCGTGGTTGG GGGCATCGGT TCTGAACTTG GGAGAGTGGT TTATCAAGCG GATGCCATTT GTTCGTCACA TCTACAACGC CTCCAAGCAA ATCAGCACGG CCATATCGCC TGATCAAAAT ACACAAGCAT TCAAGGAAGT TGCAATCATC AGGCATCCCC GTGTAGGTGA ATACGCATTT GGCTTCATTA CATCAACTGT TGTTCTCCAG AACTACCCAA CCGAGGAGGA ACTTTGCTGT GTATACGTTC CCACGAACCA CCTTTACATT GGAGATATAC TACTTGTCAA CAGTAATGAC GTTATCAGGC CAAATCTCTC TGTCCGGGAA GGAATAGAGA TTGTTGTCTC GGGTGGAATG TCAATGCCGC AGATTCTATC AACTCTTGAT AAACCTTCGT CCTCGATTGA TAGAGCTACA AGCTTATAGT TTCAACCAGA AGATTATCTT TTTGTTAGGA TTTGTTGATG AGTGTGTGTC TGTCTCTGGA GTCTCTTCAA TATTGTTGTA ATATTTCATT TGTGTTCACA AAAGTGTATA ATGTAAGATA GGTCTCTCTC TTCTTAGATA TGAATCTTTC TCCTGAAAAT ATTATTTTTC TTGAAAA 
Length1137
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19472960.. 19475080
Download Sequence
A.thaliana
AGI-codeAT2G20120.1
DescriptionProtein of unknown function (DUF502)
TAIR curator summaryEncodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.
Alias[COV1][CONTINUOUS VASCULAR RING]
Gene coexpression
MR
MR Locus Description
4 Ahg497366 plant U-box 9
6.7082 Ahg488743 Galactose oxidase/kelch repeat superfamily protein
11.1803 Ahg494737 Zinc finger C-x8-C-x5-C-x3-H type family protein
14.8997 Ahg472300 DNA-binding bromodomain-containing protein
16.1245 Ahg933989 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
20.9045 Ahg473130 peroxin 7
28.775 Ahg496218 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
33.4365 Ahg477944 Zinc finger C-x8-C-x5-C-x3-H type family protein
36.756 Ahg488259 Proteasome component (PCI) domain protein
38.4057 Ahg899688
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression