Detail



ID : Ahg478153

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478153|fgenesh2_kg.3__854__AT3G08550.1
Sequence
CACAAAAATA AAATAAAAAG AAAGATCTCA GAATCGCGTC TTTCTTCTTC TTCTTCTTTT GTTTTTTTTT CAAATTCGTG GAGCTAACCA TGAAATCGAC TCACCATCAC AGAGCTCCAC TGATTTCTGC TTCTTCCTCA TCTTCATCCT CTTCCCAAAA CCATTCTTTT GTCTCTAGGC TCCTCCTTCT CCTTACTTTA CTTCCAGTTT CCCTTGCTTG TCTCGCCTTT ATCCTCCAAT GGCGAGGCGG TGGTCTCGCC GATCCTGCCT CTGCTTCTGT TCGTTCATCT ACGTCGGTTC CTGGCGGCTC CGATCTCAAT CACGAGGTGT TTCCCGGCAT GGAGACTGTT TCTTCTGTCT CCCCAAAGTC TCACCAATCG TCCTCCGACT GCTCAAATCT AGCTCGCAGC TCTTCTCCTT CCTTTCCTTA CTATGGTGAT TGGAAGTTTG GTGTTGATAC TAGTTTAAAG CCTAAGATAT GTATTACGAC TAGCACGTCA GCTGGATTGG ATCAGATTCT ACCATGGATG TTCTACCATA AGGTTCTAGG AGTCTCTACA TTCTTCCTTT TCGTAGAAGG GAAAGCTGCT ACTCCGAGTA TTTCTAAAGT GCTGGAGTCT ATTCCTGGGG TTAAAGTAAT ATACAGGACG AAAGAGCTTG AGGAGAAGCA AGCAAAGAGC CGGATTTGGA ATGAGACTTG GCTATCGTCT TTCTTTTATA AGCCCTGCAA TTATGAGTTA TTTGTCAAAC AATCTCTCAA CATGGAAATG GCTATTGTCA TGGCAAGGGA TGCGGGCATG GATTGGATAC TTCATCTGGA CACAGATGAG CTAATATACC CAGCAGGTGC TCGTGAGTAC TCACTGAGAC GGTTGCTGCT TGATGTTCCT CCAAATGTGG ATATGGTTAT ATTTCCAAAT TACGAAAGCA GCGTAGAAAG AGATGATATC AAGGATCCTT TTACAGAGGT GTCAATGTTC AAGAAGAATT ATGATCATCT TCCAAAAGAT ACATATTTTG GAATGTACAA AGAAGCAACA CGAAATAATC CAAATTACTT CTTGACTTAT GGTAACGGCA AATCAGTTGC TCGGGTTCAA GATCACCTTC GTCCAAATGG AGCACACAGA TGGCATAATT ACATGAAAAC TCCCAATGAA ATCAAATTGG AGGAGGCTGC TGTCCTACAC TACACATATG CAAAATTTTC TGACTTAACA TCCAGGCGTG ATCGATGTGG CTGCAAGCCT ACAAAAGAAG ACGTGAAAAG ATGCTTTATG TTGGACTTTG ATAGATCTGC ATTTATAATT GCGTCAACAG CAACTGAAGA AGAAATGTTA AGCTGGTACC GTGAACATGT TGTGTGGGGC GACAAAGAGG TGAAGACGAA ACTCCTTAGG AAGGGTATTC TGACTCGCAT CTATTCACCA ATGGTTGTTA TACAAGCATT GAAAGAATCT GGTGTCTTTA GCTCGGTTGT CTCATCAGTG TCTACAAATC TTTCAAAGAA AAAGTTCTTA TCATCAATTC ACAAAAGCAA CTCATCCAGG TCTACTGCAT CTGAGTCCCT TCCATCAAAG GAAAACAAGT CTGAAGGCAT CTCTGCAAGG CACCTTCTTG GGGATGAATC AGCCATCCCT CCTTTATCGC CACCTGGGAT GGAACACGCT AGATTTATCA CAGAGGATTA ACAGGTTTTA GCATTGAGCT GATGCATTCG CTTTTACAGA TATTGATACT GGGTACAATA TGAGTACTGT GTAGCTTTAG GAAGGCAAGT GAAGTGGAAC ATAGAAGAAC GAAGAAAGCA GGTTTGTGCG ATTCTTCCCA ATCATCTTGA AAGACATCGG TTCTCTTATC TCATTTTGCT CTCCCTCTGC AACTTATGAT AGATGAGTTT GCAGCATTTT TCTGTTGTCA TTGTTATTTC TATGTAAGTT TATTACTATG TACAGAACTT CAAAGCACAG AGGCCTGGAA TCAT 
Length1984
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3185821.. 3189228
Download Sequence
A.thaliana
AGI-codeAT3G08550.1
Descriptionelongation defective 1 protein / ELD1 protein
TAIR curator summarymutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein
Alias[ABI8][ELD1][KOB1][ABA INSENSITIVE 8][ELONGATION DEFECTIVE 1][KOBITO]
Gene coexpression
MR
MR Locus Description
4 Ahg939309 RING/U-box superfamily protein
4 Ahg484055 NHL domain-containing protein
4 Ahg487985 adaptin family protein
4.89898 Ahg924306 CwfJ-like family protein
5.47723 Ahg471648 basic pentacysteine 2
7.74597 Ahg488188 IKI3 family protein
9.53939 Ahg491398
15.1658 Ahg929279 Galactosyltransferase family protein
17.3205 Ahg484318 aminoalcoholphosphotransferase
17.8606 Ahg494250 PPPDE putative thiol peptidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression