Detail



ID : Ahg478175

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478175|fgenesh2_kg.3__876__AT3G08720.1
Sequence
TCTCGTCTCC TTCTCGTCTC CTTCCTCAAG CATATTCTCT GTTAGAGCAG CACGTTGATG GCATTGGGAC ACTTGTGCAG CATCCACTGT TTCCTTAATA TAGGGAAACA AGAAGAGCTT CTTCTCCTTG GTTTTGGTTT GCCTATTCCC AGTTTCTTCC TCATTTAACT TTTTTCTTAG GAGACCCTCA TCCATCTGGT GAACTTGTGA AGCTTTCTCT GTGCTTCTTT TGGCGATTGG TTAGAGATAT GGTTTCTTCT CAGTGTCCTG TTGCAAACAA AAACCAGACT GGGAAGCCGT TTCAGAAACA GCTATATTTA TCCATCAGCC CTCCAAAATC TGTCTTGAAT GATAACCTTG AGCTTGAATT CTCTGATGTG TTTGGTCCAA TGCCTGAAGC TAACTCTGGG GAGGCCAGTG ATGTTGTTTA CGACGAGCCT GCTGTTGTCT ACAGTCGATC CCATTCGTTG GTGGGACCGT CTTTGGTTGT TAGCCATTCT TTGAAGTTGA ACAAGCTCAC TTTACGAGAG ACTGAGGACT CAGTTGACTT GGTGGAGTGT GTTGAAGGTG AATCTATTAA AGAAAACGAT GAATTCTCTG GTAATGATGA CACTGACAGT GACAAAGCTC TAGAGGAGGT CTCAGGTGTA GTAGGCATTG AGGACTTTGA GGTATTGAAG GTTGTGGGGC AAGGTGCATT TGGGAAAGTG TACCAGGTGA GGAAAAAAGA CACTTCTGAG ATATACGCGA TGAAGGTTAT GAGAAAAGAC AAGATTGTTG AGAAGAATCA TGCTGAATAC ATGAAAGCCG AGCGCGATAT TCTAACCAAA ATCGATCATC CTTTCATTGT CCAACTTAAA TACTCTTTTC AGACCAAGTA CAGGCTGTAT CTTGTGCTCG ACTTTATAAA CGGAGGTCAT CTTTTCTTCC AGCTCTATCA CCAAGGGCTT TTCAGAGAGG ACTTGGCTCG TGTGTACACT GCAGAAATCG TCTCTGCAGT TTCCCATCTC CATGAGAAAG GCATAATGCA TAGAGATCTG AAACCTGAAA ACATACTCAT GGACGTAGAT GGCCATGTGA TGTTAACTGA TTTTGGTTTA GCAAAGGAAT TTGAAGAAAA CACAAGATCA AACTCCATGT GTGGGACTAC GGAGTATATG GCCCCTGAAA TTATTCGTGG AAAAGGACAT GATAAGGCTG CCGACTGGTG GAGCGTAGGG ATCCTTCTGT ATGAGATGCT CACTGGAAAG CCGCCGTTTC TCGGGAGCAA AGGAAAGATA CAGCAGAAAA TCGTAAAGGA CAAGATCAAG CTTCCACAGT TTCTGTCTAA TGAAGCTCAT GCCTTGCTGA AAGGGCTGCT GCAAAAAGAG CCAGAAAGGA GACTGGGAAG TGGACCGAGC GGAGCAGATG AAATAAAACA GCACAAATGG TTCAAGGTGA TAAACTGGAA GAAGCTGGAG GCTAGAGAAG TACAACCAAG TTTCAAGCCA GCAGTTTCGG GAAGACAATG CATAGCAAAT TTTGACAAGT GTTGGACTGA AATGTCTGTG TTGGATTCTC CAGCAAGCAG TCCCAATTCT GATCCTAAGG CCAACCCTTT TTCTAACTTC ACATACGTCA GGCCTCCTCC CTCATTCCTT CACCGAACCA CATCCAACTT GTAGTAGATG AACTATAATA TATTAC 
Length1686
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3238628.. 3241252
Download Sequence
A.thaliana
AGI-codeAT3G08720.1
Descriptionserine/threonine protein kinase 2
TAIR curator summaryEncodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.
Alias[ATPK19][ATPK2][ATS6K2][S6K2][Arabidopsis thaliana protein kinase 19][ARABIDOPSIS THALIANA PROTEIN KINASE 2][ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2][serine/threonine protein kinase 2]
Gene coexpression
MR
MR Locus Description
5.56776 Ahg342253 NAD kinase 1
6.08276 Ahg892092 sulfoquinovosyldiacylglycerol 2
8.24621 Ahg476431 phosphate starvation-induced gene 2
8.66025 Ahg909043 PLC-like phosphodiesterases superfamily protein
8.7178 Ahg492432 acyl-CoA-binding domain 3
12.8452 Ahg895377 Calcineurin-like metallo-phosphoesterase superfamily protein
13.3041 Ahg344762 mitogen-activated protein kinase kinase kinase 14
13.6382 Ahg483646 SPX domain gene 3
14.3527 Ahg356659 aminophospholipid ATPase 2
16.2481 Ahg940069 NDR1/HIN1-like 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression