Detail



ID : Ahg895377

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895377|Al_scaffold_0006_3373
Sequence
ATGGTCTCTG ACGGGCATTC TGCTCGTTTA TATAATTCTC TCCCAATGGA GAGGGTCAGA ACGATTCTAA CCCATACCTA CCCTTATCCG CATGAGCATT CACGTCATGC TATCATTGCT GTATTCTTTG GTTGCCTATT CTTTATTTCA TCGGATAACA TGCAAACCCT CATAGAAAAG TTTTCAGTCA AGTGGTGGTC CATGTATGCA TGCTTGCTCG GATTTTTCTA CTTCTTTTCT TCTCCATTTA TCCAGAAGAC TATCAGACCA AATTATTCAA ACTTCAGTCG GTGGTACATT GCCTGGATTT TAGTTGCAGC TTTGTATCAT CTTCCTAATT TTCAGTCAAT GGGTTTGGAT TTGAGGATGA ATTTGTCCTT GTTTCTAACA ATTTACATCT CTTCCATACT CTTCCTTGTT GTCTTCCACA TCATTTTTCT TGGCCTTTGG TATGTTGGTC TTGTTTCTCG CGTGGCTGGA AGACGCCCAG AGATCTTAAC CATTCTTCAA AATTGCGCTG TTCTTAGCAT GGCTTGCTGT ATATTTTACA GCCATTGTGG TAATCGAGCT ATTTTGAGGC AAAAACCAGT TGGAAGACAG TATTCTAGCT GGTTTTCGTT TTGGAAAAGA GAACATAGGC ACAATACATG GCTTGCAAAA TTCATTCGTA TGAATGAGCT GAAAGACCAA GTGTGTTCGT CGTGGTTTGC TCCAGTTGGA TCTGCAAGTG ATTATCCACT GTTATCCAAA TGGTTCATTT ACGGGGAGAT CGCATGCAAT GGATCATGTC CTGATTCAGC TGACGAAATT TCTCCTATAT ACTCATTGTG GGCCACATTT ATCGGTCTTT ACATTGCCAA TTATGTAGTG GAGAGATCAA CTGGGTGGGC TCTGACACAC CCTCTGTCAG TCGACAAATA TGAGAAGCTG AAGAATCAGC AATTGAAACC TGATTTCTTA GATATGGTTC CTTGGTATTC AGGAACATCG GCTGATTTGT TTAAAACAGT GTTTGACCTC CTCGTGTCAG TGACAGTATT TGTTGGCCGT TTTGACATGC GGATGCTGCA GGCTGCAATG ACCAAATCTG GTGATGCTAC TGGAAGGAAG GAACTTTTAT ATGATCACCT TGCTGATAAG CAAGATTTTT GGTTTGATTT CATGGCGGAT ACTGGTGATG GTGGTAATTC ATCATATAGT GTTGCAAAAC TTCTTGCTCA GCCATCTCTC AGAGTGCCAG TGGCTGATAA TTTTATATCT CTTCCACGAG GCAATGTACT GCTTATTGGA GGAGATCTTG CATACCCAAA TCCGTCAGCT TTTACATATG AAAAACGTCT CTTTTGTCCG TTTGAGTATG CGCTGCAGCC TCCCCGTTGG TATAAAAATG ACTCTATTGC TGTTGACAAG CCTGAATTAC CCAATGGAGT GTCTGATCTG AAGAGTTATG AAGGTCCTCA ATGTTTTCTC ATCCCTGGAA ACCATGGTAA GTTTCAGGTC TCAGCTTCAT TTCTCTTTCA AATAAACTGG TTTGACGGAC TCAATACTTT CATGAGGTAT ATATGCCATA AGAATTGGTT AGGCGGCTGG CTAATGCCCC AGAAGAAAAG CTATTTTGCG CTGCATCTTC CCAAGGGATG GTGGGTGTTT GGTTTGGATC TTGCACTTCA TGGTGATATT GATGTCGACC AGTTCAAATT CTTTTCCGAA TTGGTGAAGG ACAAGGTTGG TGAGAATGAT GCTGTGATTA TTATCACGCA TGAACCAAAC TGGCTTCTTG ATTGGTACTG GAGCGGCGAT ACAGGGAAGA ACGTGAGACA TCTGATCTGC GACGTTTTGA AATACAGGTG CAAACTTAGA ATGGCAGGGG ATTTGCATCA TTATATGCGA CATTCATGTA ATCAATCAGA TGGACCTGCC CATGTCCAAC ATCTTCTTGT TAATGGCTGT GGAGGAGCTT TTCTGCATCC CACTCATGTG TTCAGCAACT TTTCAAAGTT TTATGGGGCC TCCTATGGAA GCAAGGTTGC CTACCCCTCT TTTGATGATT CAAGCAAAAT TGCTTTGGGA AATATTTTGA AATTCCGGAA AAAGAACTGG CAATTTGATT TCATTGGTGG CATTATATAC TTTATCTTGG TCTTTTCATT GTTCCCTCAG TGTAAGCTAG CTCACGTCTT ACGAGGTGAT TCGTTTTCTG GTCACCTGGA GAGTTTCTTA GGCACAGTTT GGAGCGCCTT TGCGTATGTG ATGGAACAAT CTTATGTGTC TTTTACCGGT GTCTTGATGT TGCTGATAAC TGCAATTACA TTTGTCCCCT CAAAAGTATC TCCGAAGAAA AGGGTTTTAA TTGGAGTTCT TCATGTTGCT GCTCACCTGA TGGCTGCTCT GATTCTCATG TTGATGTTGG AACTGGGCAT AGAAATCTGT ATTCAGCATA ATCTCCTTGC AAATTCTGCA GGGTATCATA CATTATATGA GTGGTACAAA TCAGTGGAAA ATGAGCATTT CCCGGACCCT ACTGGCCTTC GAGCCCGGAT CGAACAATGG ACGTTTGGCT TATATCCTGC GTGCATCAAG TATCTTATGT CAGCATTTGA TGTTCCTGAG GTGATGGCGG TTACCCGGAC CAACATTTGC AAACATGGAA TGGAATCACT TTCCCGAAGC GGAGCTGTTA TCTATTATGC TTCTGTCTTC CTTTACTTTT GGGTTTTCTC AACTCCTGTA GTGTCTATGG TATTTGGAAG CTACTTGTAT ATCTGCATCA ACTGGTTCCA CCTACACTTT GATGAAGCTT TCTCTTCACT CCGCATTGCC AATTACAAAT CTTTCACCCG TTTCCACATC CTAGAAGATG GAGACATTGA AGTTTTCACA CTTGCAGTTG ATAAGGTGCC AAAAGACTGG AAACTGGACA AAGATTGGGA TTCAGAGCCG AAACAGAGTT TCAAGATGAG CTATGAGAGA GAGTTTCCAA GTAAATGGGG TGCCTCAACA GCCCAACAAG ACCCTGTTAA TACGGTAAAG ATAGTTGATC GTTTCGTCAT TCATAGATCA CAAAAGGAAA ACGGAGAATG TTAG 
Length3084
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20306630.. 20311505
Download Sequence
A.thaliana
AGI-codeAT4G11800.1
DescriptionCalcineurin-like metallo-phosphoesterase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.74456 Ahg476431 phosphate starvation-induced gene 2
8.48528 Ahg892092 sulfoquinovosyldiacylglycerol 2
9.64365 Ahg477631 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein
12.8452 Ahg478175 serine/threonine protein kinase 2
14.8324 Ahg472566
17.2337 Ahg486043 UDP-glucose pyrophosphorylase 3
17.4642 Ahg483646 SPX domain gene 3
17.6635 Ahg920694 Pyridoxal phosphate phosphatase-related protein
18.9737 Ahg909043 PLC-like phosphodiesterases superfamily protein
19.2614 Ahg931035 monogalactosyldiacylglycerol synthase type C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression