Detail



ID : Ahg478185

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478185|fgenesh2_kg.3__886__AT3G08840.2
Sequence
ATGGCGTCCA TGGCGACCGG TGTCAGTTTT TCGATGACTA GCGGAATAGG AGGAGGAAGA GACGATGTTG AACGAGTAGC GACGGCCGTA CGGACGACGC TGAAGCTGAA TCAGAAGAAC TCACTGAGCG AGAGTACATG CAGTTTTTCG GTGATGAACA GGTATCGGGG ATCCGGAGGA GCTATACGAA CCGTATCGAA GGCCGTAGTT GACGGAGATG GGATGAGTAA GAATCTGAGA GTGGGACTCA TTTGCGGAGG TCCGTCGGCG GAGCGCGGGA TTTCTCTCAA TTCTGCTAGA TCAGTTCTCG ATCATATTCA GGGTGATGGT ATAAGCGTGA GCTGCTATTA TATAGATCCT GATCTCAAAG CCTTTGCAAT TTCCTCCGCT CAGGTGTACT CGAATACTCC TTCAGATTTC GATTTCAAGC TGGAGAGTCT TGCACAGGGA TTCTCTTCAT TATCCAAATT TGCCGAGCAT CTTGTTTCTG CCGTGGACAT TGTTTTTCCA GTAATTCATG GTCGATTTGG TGAAGATGGA GGCATTCAGG AGCTGTTGGA AAGTCACAAC ATTCCATTTG TGGGGACTGG ATCCCGTGAA TGTATTCGAG CATTTGACAA GTATGAAGCC TCTTTGGAGC TCAAGGAACT TGGTTTCATG ACAGTACCTA ACTACTTGGT GCAGGGAACT GGAGTAGACA AAAGTGAAAT AGCACAGTGG TTTACAGATA ACCAGCTGGA TCTCGAGATG GGAAAAGTCG TGGTAAAACC AGCCAAAGCA GGTTCAAGCA TTGGTGTCAA GGTTGCTTTT GGCGTAAATG ATTTAATTAA AAAGGCTATT GAACTTATTC TAGAGGGAAT TGATGATAGA GTTGTTGTGG AGGTGTTTAT TGAAGATGCA TATGAGTTCA CTGCCATCGT CCTGGATGTG GGTTCTGGTT CTGGTTGCCA TCCTGTTGTT TTGATGCCTA CTGAGGTGCA ACTTCAGTTT CATGGCAGTG GTGATCTACA AGAAAATGCA ATCTTCGACT ATCGGAGGAA GTATTTGCCG ACACAGCAGG TCACCTATCA CACTCCTCCC CGTTTCCCTA TCCATGTTAT CAAAAGTATC CGTGAAGAGG CATCTCTTAT ATTTCAAAAG CTTGGTCTAC GTGACTTTGC TCGCATTGAT GGATGGTATT TGGCTCCCAA TTCAAATTTA TCATCTGCAA GTGAAACGCT TGGAGGACCC GAGTCAGGGG ATATTATATT CACTGACATC AACCTGATAA GTGGCATGGA GCAAACCAGC TTTCTCTTCC AGCAGGCTTC TAAGGTTGGA TTTTCTCATT CAAACATTCT GCGAACAATC ATCCACCGTG CTTGCTCGAG GTTTCCCCAT CTTACTTGGT ATAATTATGG GTATAGTCAA TTACTCCAAG GTTCAACAAC CCTGGAAGTC TCTGGGGACG TCCAGAAAGT GTTTGTCATA TTTGGAGGAG ATACTTCAGA GCGGCAGGTG TCTGTAATGA GTGGAACAAA TGTCTGGATC AATTTGCAAA GATTTGTAGA TCTCAATGTA ACTCCCTGTT TGCTTTCCCC CTCACTTGGA AACTCATCAG GCGCATCTTT GAACTTGGAC AACAGAGAAG TCTGGGCTTT GCCCTACTCG GTTGTGCTAA GGCACACTGC TGAGGAAGTT CTTGCAGCGT GCTTAGAAGC AGTCGAGCCT GATCGGGCTT TGTTTACATC TCTCCTGCAG AAGCAAGTGA TGGAGGATCT TATGGATGGT TTGAAGAATC AAAGCTGGTT TACAGGGTTT GATATCACAG ACGAACTGCC TAGAAATTTC TCGTTGAAAG AGTGGATCAA GCATGCCAAG GAAGCTCAAG CAACTGTCTT CATTGCAGGC TATCGCTATA TCTTTATGCA TGGAGGAATT GGGGAAGATG GTACACTGCA GGTCTTGCTG GAGGATGAAG GAGTTTCTTA TACAGGTCCA GGCGTATTAG CTTCAAGGAC TTGCATGGAC AAGGTTATGA CATCTCAGGC TCTTAGTCAT CTTTCAGAGT TTGGAATTCA TACCATAAGC AAAGATGTGA AGAGAACAGA GGATATAATG CATGAGACCA TCCCAAATGT TTGGGATGAA TTGATCAATA AGTTTCAGTG TCTCACACTA TGTGTTAAAC CAGCAAAGGA TGGATGTTCC ACTGGCGTTG CAAGATTATG TTCCTCTGAA GACCTTGCTG TATATGTACA AGCTTTGAAA GATTGTCTAC TAAGGATTCC TCCAAATACT CTTTCCAAGA CACATGGAAC GATTGAGATG CCAAATCCTA CTCCAGAGTT CTTGATTTTT GAACCATTTG TTGAAACCGA TGAAATCATA GTTTCATCCA AAGCCAAGCA GCAGCTCTCT TGGAAAGGTA GGAGGCGGTG GGTAGAAATG ACTGTGGGTG TAATCGGAAA GCGTGGGTCA ATGCATTCGC TGAGTCCTAG TCTTACTGTC AAGGAAAGTG GGGATATATT GTCTCTCGAG GAGAAGTTCC AAGGCGGCAC TGGCATAAAT CTTACTCCAC CTCCACCAAC AATCATGAGT AAGGAAGCTT TGGAGAGATG CAAACATGGT ATTGAGCTGA TTGCAGAAAC TCTCGGGCTA GAAGGGTTTT CACGGATCGA TGCTTTTGTG CACGTTGAAA CTGGAGAGGT GCTGGTTATA GAGGTAAACA CAGTTCCTGG AATGACTCCT TCCACTGTTT TAATCCAACA GGCATTAGCA GAGCAGCCGC CAATGTACCC TCCTCAATTC TTTCGCACTC TGCTCCATCT TGCTACACAG AGAGTCATTT AA 
Length2832
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3270525.. 3277131
Download Sequence
A.thaliana
AGI-codeAT3G08840.2
DescriptionD-alanine--D-alanine ligase family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg942030 UDP-Glycosyltransferase superfamily protein
5.65685 Ahg340056 Chaperone DnaJ-domain superfamily protein
7.81025 Ahg480909 Tetraspanin family protein
16.3401 Ahg911261 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
27.4226 Ahg915666 Glutathione S-transferase family protein
33.8231 Ahg322424 Cation efflux family protein
36 Ahg949509
37.9473 Ahg944149 Remorin family protein
52.4786 Ahg923311
54.1572 Ahg473775 VIRE2-interacting protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression