Detail



ID : Ahg911261

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911261|Al_scaffold_0001_1515
Sequence
ATGTTCAATT CGATGCAGAT ACTGCCACTG GAGGCTCCTC CTGCTGACGG TAACCTAGGT CCACTTCCTC CGTCGCAATT AACGGATGAA GAAATCAAAG AGAAAGAGTT GCAAACAGAG AAAAACATTT CAATTCAAGC TCACATAGCT GTGGCTACTC ATACGAAGAC TATCGGAATC ATTTATCCAC CTCCTGATAT CAGAAAAATC GTCGAGACAA CGGCTCATTT TGTTTCGCAA AACGGTTTAG AGTTTGAAAA CAAAGTTAAA ACAGAGAAAG CCAATAACCC TAATTTCAAC TTTTTGAAAA GTGATAATCC TTATCATGCC TTTTACCAGC ACAAGATCGC TGAGTACTGT GCTCAGATTC GAGACGGAGC TCAAGGTACT GATTTTGATG ATACAGAAGA TCCCCAACTT GATCCTGCTG CTTCTGCTGA TGAGTCTCAT GCAAAACCTG ACCTTCAGGA TCAATTTAGG GTTCCTCGTA AGACTTTAGA AGCTCCTGAA CCTGACAAGT ATACAGTTAG ACTTCCTATA GGGATCATGG AGGAGGAGCT TGATATTATT AAGCATACAG CGCAGTTTGT GGCGCGGAAT GGGGAATCCT TTTTAAGGGG ATTGATGAGT AGAGAGATGA ACAATACTCA GTTTCAGTTT ATGAAGCCAA CACATAGTAT GTTCACTTTT TTCACTTCTC TGGTTGATGC GTATTCAGAA GTTTTAATGC CTCCCAGAGA CTTGAAAGAA AAGCTGAGAA AGAGTGTGGC TGATTTGACG ACTGTTCTTG AGCGTTGTTT GAATCGGCTT GAATGGGATC GTTCCCAGGA GGAGGAGAGG AAGAAAGAAG AGGATGAGAA AGAGAAGGAG AGAGTGCATA TGGCTTTGAT TGATTGGCAT GATTTTGCAG TTGTTGAGTC GATAGATTTT GTAGACGAGG AAGATGAAGA GATGCCAATG CCTATGACAC TTGAGGAGGT TATAAGGAGG AGCAAAGTAT CAGCCATGGA AGAAGATGAA ATTGTTGAGC CTGGAAAGGA GGTTGAAATG GAAATGGATG AAGAAGAAGT TAAGCTTGTT GCAGAAGGAA TGAGAGCAGC AAACCTAGAA GAGTATGTTG GCTCTGTGGA GATTGAAAAT GTACACTGTG AAGAAGCACC AATGAGAATT GTTAAGAACT GGAAGAGGCC AGAAGATAGG TTTCTGACAG AGAGAGATTC GAGTAAAGTT GTTATATCAC CAATCACTGG TGAGCTCATT CCCATTACAG AGATGTCTGA GCACATGCGG ATTTCACTTA TCGATCCTAA GTTCAAAGAG CAGAAAGATC GGATGTTTGC TAAGATTCGT GAGACCACAC TTGCACAAGA TGATGAGATT GCTAAAAACA TAGTCGGGTT GGCCCGTCTG CGTCCTGATA TCTTTGGAAC AACGGAAGAA GAAGTCTCAA ATGCTGTAAA AGCAGAGATT GAGAAGAAAG ATGAGCAACC AAAACAAGTA ATATGGGATG GTCACACTGG AAGTATTGGT CGCACAGCAA ACCAAGCCTT GACTCAGAAC TCAAATGGAG AGCAAGGCGA TGGAGTTTAT GGTGATCCCA ATAGCTTCCC TGGTCCAGCC GCTCTTCCTC CTCCTCGACC AGGTGTCCCA ACAGTCCGGC CATTGCCACC ACCTCCTAAT CTCGCCTTGA ACCTCCCTCG TCCTCCTCCT TCTGTTCAGT ACCTTGGTGC ACCAAGGCCA TTAGGTGATC CGATGATTCA GCCCATGTAT CAACAACATC AGCTCTCGAT GCCTGGGCCA CATGGACACC CTTCGATGAT GATGCATCCA CCACCACAAA TGCAGCCTGT TATGCATGTG CCGTCTCCAC CGGGATCTCA GTTTGCTCAA CCTTATGGTC AGCTTCCACC GCATTCGATG GGGATGATGC ACGTGCACCC ACCACCTATG CCTGAAATGC CTCCTCCACC ACCACCCGGG GAGGCACCAC CGCCTCTTCC TGAGGAGCCA GAGCCAAAGA GACAAAAGTT CGTTGAGTCA GCCCTTGTTC CAGAAGACCA GTTTCTTGCT CAGTATCCGG GTCCGGCTAC AATCAGGGTT TCTAAGCCAA ACGAGAATGA TGGACAAGTC ATGGAGATCA CAGTGCAGTC GTTATCCGAA AATGTGGGAA GTTTGAAGGA GAAAATAGCT GGAGAGATGC AAATTCCAGC AAACAAACAG AAGTTAAGTG GAAAAGCTGG ATTCTTAAAG GACAACATGT CACTTGCACA TTACAATGTG GGAGCAGGAG AAATCCTTAC ACTGTCTTTG AGAGAACGTG GTGGGAGAAA GAGATAG 
Length2337
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5900152.. 5902572
Download Sequence
A.thaliana
AGI-codeAT1G14640.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg485207 embryo defective 2423
7.07107 Ahg478246 DHHC-type zinc finger family protein
10 Ahg899656
11.6189 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
12.49 Ahg942127 CTC-interacting domain 6
13.1909 Ahg939293
14.8997 Ahg496133
16.3401 Ahg478185 D-alanine--D-alanine ligase family
21.4942 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
22.1811 Ahg312135
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression