| Annotation |
|---|
| Description | jgi|Araly1|478188|fgenesh2_kg.3__889__AT3G08850.1 |
| Sequence |
TCTCTTTGAC AAAATCCCAA ATTTCGCATC CTCACTTTCT CCTTTGCCTT TTCTCTCTTC TGCCGCCACC ATCACCACTG TTAATTCGCC GCCGCTTCCA CATCAATCGC CGTCGTAGCC ATCATCATCG TTCGTCATCC TCCTCTTCTC CTGATTCTTA GGGTTTCCGC TGTCTCATCT GGGAGGGTTT TTCGAGCTGG ATTCTCCGCT CTTGCGCCGC TGGTGCAGCG GCTTTGTTGA TTGATCTGGA TTTCTCTGTC TTCGCTTCTA TTTTATTTTC GTTTCTCGCC CAATCCAAAC AGAAAAGCTA GGGCTGAGGA TTTGATTTGC GTGATTTCGA GGAGGTGTTA AATCGGGGTG TGTTCTCCGA TTTGGATGGC ATTAGGAGAC TTAATGGTGT CTCGGTTCTC GCAATCTTCT GTTTCTTTGG TCTCCAATCA CCGTTACGAC GAAGACTGTG TCTCTAGTCA CGATGACGGT GATTCGCGGA GGAAGGATTC TGAGGCTAAG AGCAGTAGTA GCTACGGGAA TGGTACAACG GAGGGAGCCG CCACCGCTAC CAGCATGGCA TACTTGCCTC AGACTATTGT GCTCTGCGAG CTTAGACACG ACGCATCCGA GGCTTCTGCG CCCTTGGGGA CTTCTGAGAT CGCATTGGTC CCCAAATGGC GGCTTAAAGA ACGAATGAAA ACAGGATGTG TAGCTTTAGT TTTGTGTTTG AATATTACTG TTGATCCGCC GGATGTTATA AAGATATCTC CATGTGCTAG AATCGAGGCA TGGATAGATC CATTTTCCAT GGCACCGCCT AAAGCTCTTG AGACAATTGG AAAAAATTTG AGTACTCAGT ATGAGAGATG GCAACCAAGG GCCCGCTATA AGGTTCAGCT AGATCCGACA GTAGATGAGG TGAGGAAGCT GTGCTTGACT TGTCGGAAAT ATGCAAAGAC CGAGAGAGTT CTATTCCATT ATAATGGGCA TGGTGTGCCA AAGCCTACAG CTAATGGTGA AATTTGGGTA TTCAACAAGA GTTATACACA GTACATTCCC TTGCCAATCA GTGAGCTTGA TTCCTGGTTG AAGACACCCT CCATCTATGT TTTTGACTGC TCTGCTGCTA GGATGATTCT TAATGCCTTT GCTGAGCTTC ATGATATGGG TTCTTCTGGT TCCTCTGGAT CCTCAAGGGA CTGCATTCTA CTTGCTGCTT GTGATGTACA TGAGACACTT CCACAGAGCG TTGAGTTTCC AGCTGATGTT TTTACGTCTA GCCTCACAAC GCCCATTAAA ATGGCGTTGA AATGGTTCTG CAGGCGTTCG CTTCTGAAAG AAATCATCGA TGAATCACTT ATTGACCGGA TTCCAGGCCG GCAAAATGAC CGTAAGACAT TGTTAGGGGA GTTGAACTGG ATTTTTACAG CAGTGACGGA TACAATTGCA TGGAATGTGC TTCCTCATGA ACTTTTCCAG AGATTATTCA GACAGGACTT GTTGGTCGCT AGCCTTTTCC GGAATTTCTT ACTTGCTGAG AGAATAATGC GGTCCGCAAA CTGTAATCCA ATATCTCACC CTATGCTGCC TCCTACGCAT CAACATCATA TGTGGGATGC ATGGGACATG GCTGCTGAAA TCTGTCTTTC TCACCTTCCC CAACTTGTTC TGGACCCAAC CGCAGAATTC CAGCCAAGTC CGTTTTTCAC TGAGCAATTG ACAGCTTTTG AGGTGTGGCT TGATCATGGA TCTGAGCATA AGAAGCCACC GGAGCAGTTA CCCATTGTTC TTCAGGTGTT ACTTAGCCAG TGCCATCGGT TTCGTGCTCT TGTACTTCTT GGAAGATTTC TTGATATGGG TTCATGGGCT GTGGATCTGG CCTTGTCTGT TGGAATATTC CCATATGTGC TGAAGCTTCT GCAAACAACA ACAAATGAGC TAAGACAGAT TCTGGTTTTC ATATGGACAA AGATTCTTGC ACTTGATAAG TCATGTCAAA TTGATCTTGT GAAGGATGGG GGGCATACAT ATTTCATACG ATTTCTAGAT AGCTCGGGTG CATTTCCAGA ACAACGAGCT ATGGCTGCTT TTGTTCTGGC TGTCATTGTT GATGGACATC GACGAGGCCA GGAAGCATGT CTTGAAGCTA ATTTAATTGG TGTTTGTCTG GGACACCTTG AAGCATCCAG ACCAAGTGAT CCACAGCCTG AACCATTGTT TCTACAATGG CTTTGTCTTT GTCTTGGAAA GTTATGGGAA GATTTTATGG AGGCCCAAAT AATGGGCAGG GAGGCTAATG CTTTTGAAAA GTTGGCACCT CTGCTTTCCG AGCCCCAACC TGAGGTAAGG GCTGCTGCTG TTTTTGCCCT GGGTACCTTG CTTGATATTG GGTTTGACTC TAATAAAAGT GTGGTGGAGG ATGAATTTGA TGATGATGAA AAGATTAGAG CCGAAGACGC TATCATTAAA AGTCTCTTAG ATGTAGTTTC AGATGGGAGT CCACTTGTCC GAGCAGAGGT TGCCGTAGCT CTTGCACGTT TTGCCTTTGG CCACAAACAG CACCTTAAGT TAGCCGCAGC TTCATATTGG AAGCCTCAGT CGAGTTCTTT GCTTACTTCT CTCCCTTCAA TAGCTAAATT CCATGATCCT GGGAGTGCAA CAATTGTTTC TTTACACATG AGTCCTTTGA CTAGAGTTAG CACGGATAGC CAACCAGTGG CTCGTGAGGC TAGGATCTCA AGCAGCCCTC TTGGCTCTTC TGGGCTGATG CAAGGATCTC CATTATCTGA TGATTCTTCG TTACATTCTG ATTCTGGAAT GATGCATGAC AGTGTCAGCA ATGGAGCGGT CCATCAGCCA AGACTGTTGG ACAACGCTGT TTATTCGCAG TGCGTTCGAG CTATGTTTGC ATTAGCTAAA GATCCATCTC CACGTATTGC AAGTCTCGGA CGGCGTGTGC TTTCTATTAT TGGAATCGAA CAGGTTGTTG CGAAACCCTC GAAGCCCACT GGCCGACCAG GGGAAGCTGC AACGACATCT CACACTCCAC TTGCTGGCCT AGCTCGTTCA TCCTCATGGT TTGATATGCA TGCAGGTAAT CTGCCCTTAA GTTTTAGGAC TCCCCCGGTC AGCCCCCCAA GAACAAACTA TCTAAGTGGA CTGAGGAGAG TTTGTTCATT AGAGTTCAGG CCTCATCTAT TGAGTTCACC CGACTCAGGG TTGGCTGATC CGCTTTTAGG CGTCAGTGGA TCTGAACGAA GTTTGCTTCC ACTATCAACT ATCTATAGCT GGAGTTGTGG CCACTTTTCT AAACCGCTTC TTGGTGGTGC GGATGCTAGT CAAGAGATTG CAGCCAAAAG AGAAGAGAAA GAAAAATTCG CACTTGAGCA TATTGCAAAA TGCCAGCACT CCTCTATTAG CAAGCTCAAC AATAATCCTA TTGCCAACTG GGATACGAGG TTTGAAACGG GAACAAAGAC AGCACTCCTT CACCCATTCT CTCCTATTGT AGTTGCTGCA GACGAGAATG AACGGATCAG AGTGTGGAAC TATGAGGAAG CAACTCTTCT CAATGGCTTT GACAATCATG ATTTTCCTGA CAAAGGAATT TCAAAGCTCT GCCTCGTCAA TGAACTTGAC GACTCTCAGC TACTTGTTGC GTCATGCGAT GGGTCGGTCC GGATATGGAA AAACTATGCA ACTAAGGGTA AACAAAAGCT TGTTACTGGG TTTTCTTCAA TCCAGGGTCA CAAGCCCGGT GCACGTGACT TGAACGCTGT TGTGGACTGG CAACAACAGT CCGGTTACCT GTATGCTTCT GGGGAGGTGT CAACAGTCAC ACTTTGGGAC CTGGAGAAAG AACAGCTTGT CAGATCTATT CCCTCTGAAT CAGAGTGTGG AGTTACAGCA CTTTCTGCTT CTCAAGTACA CGGAGGCCAA CTTGCTGCTG GTTTTGCCGA TGGATCTTTG AGACTCTATG ATGTTCGGTC ACCTGAACCG CTTGTCTGCG CGACTCGGCC TCATCAGAAA GTTGAAAGGG TGGTTGGACT CAGTTTTCAA CCTGGACTTG ATCCCGCAAA GGTGGTGAGT GCATCGCAGG CCGGTGACAT ACAGTTTCTT GACCTTAGAA CAACAAGGGA CACATACCTG ACAATTGATG CACACAGGGG TTCACTCACG GCTTTAGCTG TTCACAGACA CGCTCCAATA ATCGCGAGCG GATCTGCAAA ACAGCTCATT AAAGTGTTCA GCCTTCAAGG GGAACAACTA GGGAGAATCC GCTACTACCC GTCTTTCATG GCACAAAAGA TTGGTTCAGT GAGTTGCCTC ACATTTCATC CGTACCAGGT TCTCCTAGCA GCTGGAGCTG CTGACTCATT CGTCTCCATA TACACCCACG ACAACTCGCA AGCAAGATGA GTCGCAACTG TAAGTGGATA TGTTGCATTT AGCATTGCTC TCGTGATAAA AAGAAAAGCA AAAATCAGTG CAGGTCGGGT CGGTTTTGGG CCGGGGTAAA GTGGGTGTGG TTTATAGTAT TCGTTAGCCT CCGTCCAAGT TAGAAAGAAG ATCTAAGTTA ACACTAAAGA AGGAGGCTTC ACCAAATAAG TTTTATCTCT ACCTATGCAA CAACGCACGT AAATGGTGTC TGTAAATAGT TTCCCTGTTT TGCTTTTCAT TTTCTCATCT CTTGGGTGTG TGATTTCCCT TTTTTATTAA TCTTTTAAGT CTTTCCGTTT CCTAATTTGT TTCATGTGTA AAAAAAATGG TAAAAGTAAT GGTGGAAAAA TATTTGCGTT TTCGTGA |
| Length | 4797 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3277580.. 3286369 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G08850.1 |
| Description | HEAT repeat ;WD domain, G-beta repeat protein protein |
| TAIR curator summary | Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. |
| Alias | [ATRAPTOR1B][RAPTOR1][RAPTOR1B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg479603 | Ethylene insensitive 3 family protein |
| 4.47214 |
Ahg897087 | HOPM interactor 7 |
| 8.48528 |
Ahg471393 | armadillo repeat kinesin 3 |
| 8.66025 |
Ahg495190 | Protein of unknown function (DUF3414) |
| 12.4097 |
Ahg481616 | BRI1 suppressor 1 (BSU1)-like 3 |
| 12.49 |
Ahg493199 | acyl-CoA oxidase 1 |
| 14 |
Ahg488386 | U-box domain-containing protein |
| 14.2829 |
Ahg933699 | IBR domain-containing protein |
| 16.5227 |
Ahg471074 | Cysteine proteinases superfamily protein |
| 20.1246 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|