| Annotation |
|---|
| Description | jgi|Araly1|897087|Al_scaffold_0005_1053 |
| Sequence |
ATGGCGGCTG GTGGATTTTT GACTCGAGCA TTTGATACGA TGCTTAAGGA GTCCGGAGGA AAGAAGTATC CTGATCTCCA GAAAGCTATT CAGGCTTATC AAGATGGTTC GAAGGTTGTT ACACAGGCTG CATCCTCGAG TGTAGACGAG AGTTCACAAG CTGAAGTTGG AGGTGAAAAA ACTGGGGGAG AAACAGATGA ACCGAAAAAA GTCCCAAGTT CTGAAGTGGC CGAGCAGGCT AGCCAGTTAA AAAATGAGAC TATAAATGTT TCCTTAGCAA ATGCTGGACA CACATTAGGG GGAGCGGAAG TGGAGCTTGT TCTGAAACCT CTACGCCTTG CATTTGAGAC AAAGAACTTA AAAATATTTG ATGCTGCTTT GGATTGTCTT CATAAACTCA TTGCCTATGA TCATTTGGAG GGGGATCCGG GATTGGATGG TGGAAAAAAC TCTGCACCTT TCACCGACAT TCTGAACATG GTTTGCAGCT GTGTTGATAA TTCATCACCA GACAGCACTG TACTCCAAGT GCTGAAGGTT CTTCTTACAG CTGTTGCTTC AGGAAAGTTC AAAGTGCATG GGGAGCCATT GCTGGGAGTT ATTCGAGTTT GCTATAACAT TGCTCTAAAC AGCAAGAGCC CAATTAACCA AGCAACTTCT AAAGCAATGC TGACTCAGAT GATAAGCATT GTATTCAGGA GAATGGAGAC TGACATTGTT TCCGCACCAT CCACAGTGTC TCAGGAAGAT CATGTTTCAG GCGACAGTTC AAGCCCTAAA AATGAAGAAA TAACTGCAGC TGACGAAAAT GAGAAAGAAA TGACCTTAGG AGATGCACTC ACTCAGGCAA AAGACACAAC TCTTGCTTCT GTTGAAGAGC TGCATACCCT TGTGGGCGGT GCTGATATTA AGGGTTTAGA AGCTGCCCTT GACAAAGCTG TGCATCTTGA AGATGGCAAG AAGATAAAAC GGGGCATCGA GCTGGAGAGC ATGAGTATTG GACAGCGTGA TGCATTGCTT GTTTTCCGTA CCCTTTGCAA GATGGGTATG AAAGAAGATA GTGATGAAGT CACAACCAAG ACCCGTATAT TGTCTCTTGA GCTTCTTCAG GGTATGTTAG AAGGAGTTAG TCATTCGTTT ACAAAGAACT TTCACTTTAT AGATTCAGTG AAAGCCTACC TCTCATATGC ATTGTTGCGG GCTTCAGTAT CTCAGTCTTC TGTCATATTT CAGTATGCAT CTGGTATCTT CTCCGTGCTT TTACTGCGGT TCAGAGACAG TTTAAAATTT AGAAATTCCT TTTATTGTGG GGATTGTTAC CTTTCACCAT ATTTTTCTGA TCCTAAATCT CACTTTCAGG GTGAAATTGG TATCTTTTTC CCCATCATCA TCTTAAGATC ATTAGATAGC TCCGAGTGTC CCAATGACCA AAAGATGGGT GTTCTTAGGA TGCTTGAGAA AGTCTGCAAA GATCCGCAGA TGCTTGTTGA TGTGTATGTA AACTATGATT GTGATCTAGA GGCTCCAAAC TTGTTTGAGC GCATGGTAAC AACTTTGTCT AAAATTGCTC AAGGGTCTCA GAGTGCTGAT CCAAATCCTG CCATGGCTTC GCAGACAGCT TCAGTTAAAG GTTCATCCCT TCAGTGCCTC GTCAACGTTC TTAAATCACT AGTTGATTGG GAGAAAATAA GGAGAGAGGC AGAAAATAGT ACACGAAATG CAAATGAGGA CTCTGCTTCT GCTGGAGAGC CAATTGAAAC CAAAAGCAGG GAAGATATCC CAAGCAACTT TGAGAAGGCT AAAGCTCATA AATCCACAAT GGAGGCTGCC ATCTCCGAGT TCAACAGGAA TTCAGTGAAG GGTGTCGAAT ATCTAATTGC AAACAAGTTG GTCGAAAGGA ATCCTGCTTC AGTTGCACAG TTTCTGAGAA GTACTTCGAA TCTGAGCAAG GTTATGATTG GCGATTATCT GGGCCAACAC GAGGAGTTTC CTCTTGCTGT CATGCACGCA TATGTTGATT CAATGAAATT TTCGGAAATG AAGTTTCATT CAGCTATTCG TGAATTTCTC AAAGGTTTTA GACTTCCAGG AGAGGCCCAA AAAATTGATC GCATTATGGA AAAGTTTGCT GAGAGATATT GCGCAGACAA TCCGGGTCTT TTCAAGAATG CAGATACTGC ATATGTTCTA GCCTATGCAG TTATCATGTT AAATACAGAT GCACATAATC CAATGGTTTG GCCTAAGATG TCAAAATCGG ATTTCACACG TATGAATGCC ACGAATGATC CTGAAGATTG TGCTCCAACT GAACTTCTGG AAGAGATCTA TGATTCTATT GTACAAGAAG AAATTAAACT AAAAGATGAT GACACCATGA AGAAGCTCAG CAGTCAAAGG CCAGGAGGAG AAGAAAGAGG TGGTCTTGTC AGTATTCTTA ATCTGGGTTT GCCAAAAAGA ATATCAGCAG CTGATGCTAA GTCTGAGACT GAGGACATTG TTAGGAAAAC ACAGGAAATT TTCCGGAAGC ATGGAGTGAA ACGAGGAGTC TTCCACACTG TTGAGCAAGT CGAAATTATA AGGCCCATGG TGGAAGCTGT TGGGTGGCCT TTACTTGCTG CTTTCTCCGT TACAATGGAA GTAGGTGATA ACAAACCAAG GATTCTTCTC TGCATGGAGG GATTTAAAGC TGGAATACAT ATTGCTTATG TTCTTGGAAT GGATACAATG CGATATGCCT TTCTAACATC GCTTGTCAGG TTCACTTTCT TGCATGCTCC AAAAGAAATG CGGAGCAAAA ATGTTGAAGC ATTGAGGATA TTACTGGCTT TGTGTGACTC GGAACCTGAT ACCCTTCAAG ATACTTGGAA TGCAGTTTTA GAATGTGTTT CTAGGCTTGA ATTCATTATT TCTACTCCTG GGATTGCTGC AACAGTAATG CATGGATCAA ACCAGATCTC CAGGGATGGG GTTGTTCAAT CATTGAAGGA GTTAGCCGGG AGGCCTGCTG AACAAGTTTT TGTAAACAGT GTCAAGCTGC CCAGTGAATC TGTTGTGGAA TTCTTTACTG CTCTATGTGG TGTTTCAGCT GAAGAACTGA AACAGTCTCC TGCCCGTGTT TTCAGCTTGC AGAAGCTAGT GGAGATCAGT TATTACAATA TAGCTCGTAT CCGAATGGTC TGGGCAAGAA TATGGTCTGT CCTTGCCGAA CATTTCGTAT CTGCTGGTAG CCATCATGAT GAAAAAATTG CAATGTATGC CATAGATTCT CTGAGACAGC TCGGGATGAA GTATTTGGAA CGTGCTGAGC TCACCAATTT CACTTTCCAA AATGATATTC TCAAACCGTT CGTTATTATC ATGCGGAATA CTCAAAGCCA GACCATAAGG AGCCTAATTG TTGACTGCAT CGTTCAGATG ATAAAATCTA AAGTTGGAAG TATAAAATCG GGATGGAGGA GTGTTTTTAT GATATTTACA GCAGCTGCAG ATGACGAAGT TGAATCGATA GTTGAAAAAT CATTTGAGAA TGTTGAGCAA GTTATTCTGG AACACTTTGA CCAGGTGATA GGTGACTGCT TCATGGATTG CGTCAATTGT CTCATCAGGT TTGCCAATAA TAAAGCTTCA GACCGGATAA GCCTGAAAGC TATTGCCCTT CTCAGAATAT GTGAGGATCG GCTTGCAGAG GGACTTATAC CTGGTGGTGT TCTCAAGCCC GTTGATGGCA ATGAGGATGA AACTTTTGAT GTGACAGAGC ATTACTGGTT TCCGATGCTT GCCGGTCTGT CTGATCTCAC ATCTGATTTT AGGCCCGAAG TTAGAAACTG TGCTTTGGAG GTGTTGTTTG ATTTGCTGAA TGAAAGGGGA AACAAGTTCT CCACACCTTT CTGGGAGAGT ATCTTCCATC GCATCTTGTT TCCAATTTTT GATCATGTGA GTCATGCTGG AAAGGAAAGC TTAATATCTT CCGGGGATGT AAAATTTCGT GAAACAAGCA TTCATTCCCT CCAGCTCCTC TGCAATCTCT TCAATACGTT CTATAAGGAA GTATGTTTTA TGCTGCCTCC ACTTTTAAGT TTGCTCCTAG ACTGTGCGAA GAAATCAGAT CAGACAGTCG TGTCAATTTC CTTAGGAGCA TTGGTTCACC TCATCGAGGT TGGAGGCCAC CAATTTAGTG AGGGAGACTG GGATATGCTT TTGAAAAGCA TAAGAGATGC ATCATACACA ACTCAACCGC TGGAGCTGTT GAATGCTTTG AGTTTTGACA ATCCGAAAAA GAACCTAGTT CTGACAGGAG ACATAGAGGC CGATGCCTCT GATTCTCCAC GAGTTGATCG TAATCCGGAC GATATTAAAG ATAATGGGAA AGTTTCCGCC CAGGCATCTC CAAGGATTGG TACTCATGGT GCTTCCGTAG AATCTGGGAT ACCGCCTAAG TCTGATGGCT CGGAAGGTCG TCCATCGTCA TCTGGAAGAG CTCAAAAGGA TGGGGATGAT GTGAATTTGC AGCGGAGTCA GACTTTTGGC CAAAGATTCA TGGACAATAT CTTCCTCAGG AATCTCACAT CTCAACCAAA AAGCTCTGTT GCAGAAGTGT CTGTACCTTC CTCTCCATAT AAGCATGAAG ATCCTACAGA GCCCGACAGC AGAGAAGAAG AGAGTCCAGC TCTGGGAGCT ATTAGACGAA AATGCATCAC ACAATTACTA CTACTTGGTG CTATCAACAG CATTCAGCAA AAATACTGGA GTAATTTGAA AACACTACAG AAGATTGCGA TTATGGACAT CTTATTCTCT TTCATAGAAT TTGCTTCTTC CTACAATTCA TATTCTAATC TCAGAACACG TATGAATCAC ATTCCCGCTG AGAGGCCACC TTTAAACCTT CTCCGGCAAG AGCTGGAAGG AACCACCATA TATTTGGACG TCTTGCAAAA GACAACTTCT GGGCTTGCAG ATGATGCATC TAACTCGGAA GATAGACTAG AAGGTGCAGC AGAAGAAAAA TTGGTATCGT TCTGTGAACA GGTGCTGAAA GAAACATCTG ATCTCCAGTC CACTTTGGGG GAGACTACTA ACATGGATGT CCATCGGGTA CTGGAGCTGC GTTCTCCTGT GATTGTGAAG GTTTTGGAAG GCATGTGCTT CATGAACAAC ACAATATTCA GGAAACACAT GAGAGAGTTC TACCCTCTGC TCACAAGGCT CATGGACATA AGAGGTGCAC TAGCCAACCT TTTCAAAGCA CAATTGAAGC CACTTTTGCA ACAGTAA |
| Length | 5277 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 9579233.. 9590106 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G43300.1 |
| Description | HOPM interactor 7 |
| TAIR curator summary | AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. |
| Alias | [ATMIN7][BEN1][HOPM interactor 7][BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg472338 | squamosa promoter binding protein-like 14 |
| 4.47214 |
Ahg478188 | HEAT repeat ;WD domain, G-beta repeat protein protein |
| 4.89898 |
Ahg488386 | U-box domain-containing protein |
| 5.74456 |
Ahg480601 | ubiquitin family protein |
| 6.63325 |
Ahg496645 | beta-ureidopropionase |
| 7.07107 |
Ahg916552 | |
| 8.66025 |
Ahg928168 | embryo defective 2016 |
| 8.94427 |
Ahg475439 | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain |
| 11.225 |
Ahg312255 | Disease resistance protein (CC-NBS-LRR class) family |
| 11.4018 |
Ahg488411 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|