Detail



ID : Ahg474214

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474214|fgenesh2_kg.1__4168__AT1G50940.1
Sequence
AATCAGAAGA GAAAACGATG ACGAGAACTG TTCTACTGAG AGCTCTGACG AAGAACAAGT TCGTCGCCTC GAATGCTCCT CGATCTATCT CCATCTCCAT CTCCATCACC AATCTCTCTC GATGCATTAG CACTCTGATT CTAGCAGAAC ATGAGAGTGG TTCAATCAAA CCTCAGACAG TGAGTACAGT AGTTGCAGCT AATTCTTTAG GTGAGAATTC TTCAATTTCT TTGTTATTGG CTGGTTCTGG TTCTTCTCTT CAAGAAGCTG CTTCTCAAGC TGCCTCTTGT CATCCTTCTG TTTCAGAGGT ACTTGTTGCT GATTCTGATA AATTTGAGTA CCCTTTAGCT GAGCCTTGGG CTAAATTGGT TGACTTTGTT CGTCTACAAG GAGATTACTC TCACATTCTT GCTTCCTCAA GTTCGTTTGG CAAGAATTTA TTACCCCGTG TCGCTGCTCT TTTAGATGTT TCTCCTATTA CCGATGTTGT CAAAATCTTA GGATCCGATC AGTTTGTCAG GCCTATTTAT GCGGGAAACG CTTTGTGTAC AGTTCGTTAT ACTGGGGCGG GTCCTTGTAT GTTGACTATT AGATCTACAT CTTTTCCTGT CGCCCCAATT ACAGCAGACT CCGAGTCAAA GAAAGCTACT ATCTCTCAGA TTGATCTCTC AAACTTCAAA GAAGACTCTG TCAGTAAATC TAGATATGTG GGACGTTCAA CTCAGGATAC AGAACGGCCT GATCTTGGAA GTGCTCGCGT TGTGATCACT GGTGGAAGGG CGCTAAAGAG TGTTGAGAAT TTTAAAATGA TCGAAAAGCT TGCAGAAAAA CTTGGTGGAG CAGTTGGTGC TACTCGTGCT GCTGTTGATG CTGGATATGT TCCTAATGAT CTTCAGGTGG GACAAACAGG TAAAATAGTA GCACCAGAGC TATACATGGC ATTTGGTGTT TCAGGAGCCA TTCAACACTT AGCTGGAATT AAGGATTCTA AGGTGATTGT TGCGGTTAAT AAAGACGCCG ATGCACCTAT TTTCCAGGTA GCTGATTATG GACTTGTTGG AGATCTTTTC GAAGTGATAC CCGAGTTGCT GGAGAAGCTT CCAGAAAAGA AATGAGAAGC CGAGAGACCG AAACTCGTCT CTGTTTATCA TCTCTTAAGC TCGGTATTTT CAGGTGCAGA CCATAGTAAG TAGTGTATAT AGCAAAACTG TAATAAAAAA AACGGTCTGG AGTCTGACCA AACAAAAGCA AAGTGTTTAA CTTTCAATAG GAATTCAGTT TTCTAT 
Length1286
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25461175.. 25463341
Download Sequence
A.thaliana
AGI-codeAT1G50940.1
Descriptionelectron transfer flavoprotein alpha
TAIR curator summaryEncodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness.
Alias[ETFALPHA][electron transfer flavoprotein alpha]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg480392
18.4391 Ahg478229 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)
20.9762 Ahg493843 RING/U-box superfamily protein
27.5681 Ahg949042 rotamase FKBP 1
27.9285 Ahg496977
28 Ahg493329 EamA-like transporter family
28.9137 Ahg496458 P-loop containing nucleoside triphosphate hydrolases superfamily protein
30 Ahg475455 shaggy-like kinase 42
31.4006 Ahg890756 Pre-mRNA-processing-splicing factor
32.4346 Ahg485395
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression