Detail



ID : Ahg478245

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478245|fgenesh2_kg.3__946__AT3G09300.1
Sequence
AAACAAGTGA CAACGAAGAC CAAGCAGGTC CAGCACACGA TCCTAAATCC TGTGCATCGT CTCCATCGCT GGTCTTCCAT TATTGACGAA TCTCTTTGCT TTTTTTCTTC CTTCTTAAAC AAACCCAATT CGATTTCAAC GAACGCCTCT TCTCTCTCAC TCTCTTTCCC GATTTGTTCA TTTGCCGGAG CTCGTAGTGT AAGCGGATCC GCGGCTGAGA GATGGCTCCT AATGATCCTA AAAAAGCCGG TGGCGGAAGT GGTTTCTTCG CTTCTCTTGC TTCTTCGATC TCCAATTTGG GATCTGCTAT GACCAAATCA GTTAATGGTT TGGTTCCCTA TGAGGGGCTT GAAGTTATCA ATCCCGAAGG AAGTACAGAT GATGCAGAGG AGGAAGCAAG CAGAGGAAGA TGGAAGCAAG AGGATCGAGA TGGGTATTGG AAGATGATGC AGAAGTACAT AGGATCTGAT GTTACATCAA TGGTGACCCT TCCTGTGATT ATTTTTGAAC CAATGACAAT GCTCCAGAAA ATGGCAGAGT TGATGGAATA CTCGCATCTC CTAGACATGG CAGACAAAAC TGAGGACCCT TATATGCGCA TGGTGTATGC ATCATCATGG GCTATATCCG TGTATTATGC TTTCCAACGT ACCTGGAAAC CATTCAATCC AATCCTCGGT GAGACTTATG AGATGGCTAA TTACAATGGT GTTAACTTCA TATCTGAACA GGTCAGCCAT CACCCACCAA TGAGTGCTGG TCATGCTGAA AATGAGCATT TTACGTATGA TTGTACTTCA AAACTGAAAA CAAAATTTCT GGGAAATTCC ATTGACGTTT ACCCAGTAGG AAGGACACGG GTGACACTTA AAAGAGATGG AGTTGTTCTT GACTTGGTAC CTCCTCTGAC CAAAGTTCAC AACCTAATCT TTGGACGAAC TTGGGTCGAT TCGCCTGGGG AAATGATCAT GACAAACCTG ACCACCGGTG ACAAAGTTGT GCTTTACTTT CAACCATGTG GCTGGTTCGG ATCTGGTCGA TATGAAGTGG ATGGATATGT CTATAACGCC TCTGAGGAGC CTAAGATACT CATGACTGGC AAATGGAACG AGTCCATGAG TTATCAGCCG TGTGACGGTG AAGGTGAACC TCTCCCAGGC ACCGAACTGA AAGAGGTATG GAAACTCGCT GATGTTCCAA AGGATGACAA ATACCAATAC ACACACTTTG CTCACAAGAT CAATAGTTTC GACACTGCCC CGAAAAAGCT GTTGCCGTCT GATTCACGGT TACGACCTGA TAGATACGCA CTTGAGATGG GCGACATGTC CAAATCAGGC AATGAGAAAA GCAGCATGGA AGAGAGACAG AGAGCTGAAA AGAGAACCCG CGAAGAGAAA GGCCAAGGCT TTACTCCTAA ATGGTTCGAT GTAACGGAAG AAGTCACTGC TACACCATGG GGTGATCTCG AAGTTTACCA ATTCAATGGA AAGTACTCGG AGCATCGTGC AGCTGCCGAT AACTCTGAAG ATAACACTGA CCCTAAGTCG ATCCAATTCA ACCCATGGCA ATTTCAAGAT CTGTCTACTT AAAATTCTTA TTCTCTCGTA GTTGCAACAA ACTTTTTTCT ACATCTGCTA GCTTTCCCAT TCATTGCTTT CTCTAGTGTT AGTTTACAAC TTCTACTGTT TTTTCGTCGT CATAGTTATC TTCTTCTTCT T 
Length1721
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3467948.. 3475437
Download Sequence
A.thaliana
AGI-codeAT3G09300.1
DescriptionOSBP(oxysterol binding protein)-related protein 3B
TAIR curator summary
Alias[ORP3B][OSBP(oxysterol binding protein)-related protein 3B]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg473195 double-stranded DNA-binding family protein
4.79583 Ahg495939 regulatory particle triple-A ATPase 3
6.9282 Ahg478504
8.77496 Ahg495846
8.83176 Ahg890655 TOPLESS-related 2
10.198 Ahg489926 Tetratricopeptide repeat (TPR)-like superfamily protein
10.247 Ahg475254 Clathrin adaptor complexes medium subunit family protein
12.1244 Ahg490363 Per1-like family protein
20.6155 Ahg919721 RAB GTPase 11C
21.6333 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression