Detail



ID : Ahg478278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478278|fgenesh2_kg.3__979__AT3G09580.1
Sequence
GAATGAGAAA AACCTTATCC AAACTTTTAA AATGCCGCCA TTGGCGAACA CTCTCCCAAT CTCATCTATT TCTCAATTCT TCCCTCCCCG CCGCGGCCAT GCAAATCACC GATATCGACG CTTTTCCGGA GCTCAATCTT CCACGGCAGA CCCGTACAAT CGGAAGAATC AAACTGGCGT CATCATCATC GGCGCTGGAC TCGCTGGTTT AGCCGCCGCG AACCAGCTCA CCTCCAAACG AATCCCTTTC CTACTCCTCG AAGCTTCCGA CGGCGTCGGC GGACGCGTCC GTACAGATAT CGTCGACGGC TTCTTTCTGG ACAGAGGATT TCAGATTTTC ATCACTGCGT ATCCCGAAGC TAAAAAGCTT CTAGATTACG AAGCACTGGA TCTGCAGCGA TTCTACGCCG GAGCTAAGGT TTTTTACGGC GGAAAATTTC ACACCGTAGC TGATCCTCTC CGACATTTTT GGGATTCGGT GGCATCTCTC ACGAATCCGA TTGGATCCGT TGTGGACAAA GGGCTTATCG CTTTGACGAG AGCTAGGGTT CTAATCAAGT CAGACGAAGA AATATTGACT GCTTCCGATG AAGTTCCGAC CATTGATCTC CTCCGTAAGA TCGGTTTCTC CGAAGCGATT CTTGATCGGT TCTTCCGACC ATTCTTCGGC GGAATTTTCT TCGACAGAGA CCTCGAGACG ACCTCGAAGC TCTTTGATTT CGTTTTCCGG TGTCTTGCTC TCGGAGAAAA TACACTTCCA GCCATGGGAA TCGGAGAAAT CTCGAACCAG TTGGCCGCGA AATTACCAGC TAATTCCGTC TTGTTGAACA CAAGGGTCGC TTCGATTGAG TATCCAAATG GAACGGGTTC TGATCCACCT AGCGTGAGAC TCCAAGACGG CGGCGTTTTG AAGGCAGAGC TAGGTGTCAT AGTCGCCGTC GAGCAACCGG AAGTGGATAA GCTTCTCGAT GGGATCAGAG ACCCGGTTAT GACAAAACCG GCTCGGAGCA CCATTTGTCT CTACTTTACA GCTGAACCAA ACCAGATACC GGTACAAGAC CCGGTTCTAT GTCTCAACGG GACAAATACC GGTATAATCA ACAACTTGTT CTTTGCTACA AATGTTGCTC GGACATACGC GCCACCGGGA AAGGCTCTAG TTTCGGTATC ATTGATCGGA TCGTTCGAGG ATAGATCCGA TGATGACTTA GCAGCAGAGG TTATTAGAGA ACTCTCTGGT TGGTTTGGTG AGTCTTCGGT TATGTCATGG AAACATTTGA AAACGTACCG GATCCAATTC GCTCAGCCTA ACCAATGCCC ACCCACTGAT TTGGTTAAGA GTCCTCGGGT CGGGTCGGGT CTTTACTTGA GCGGTGATTA CATGACTTCT GCTACATTTG ACGGAGCTTT GGTCTCTGGG AGACGAGCCG TGGAAGTTTT GTTACGAGAA AAGGGACTAA TCTAATAGAA ATTTTCTGTT ATTCAAGACT CTTTGTGTAG CTTTATTCAT GGCTTGTATA GTTGTATGTA TCCTCTAAGA TCATATATTG GAAAATTAAA CATCATGGTT ATTGCT 
Length1576
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3562449.. 3564020
Download Sequence
A.thaliana
AGI-codeAT3G09580.1
DescriptionFAD/NAD(P)-binding oxidoreductase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg480587 pentatricopeptide (PPR) repeat-containing protein
11.9164 Ahg327641 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.8564 Ahg482072 genomes uncoupled 1
20.445 Ahg493092 C2H2 and C2HC zinc fingers superfamily protein
20.8806 Ahg482332 Ribosomal protein S5 family protein
22.4499 Ahg489706 RNA-binding (RRM/RBD/RNP motifs) family protein
27.6043 Ahg478521 Dihydroneopterin aldolase
28.8444 Ahg888526 chloride channel E
31.225 Ahg919647 glycoside hydrolase family 2 protein
33.0454 Ahg934855 Uroporphyrinogen decarboxylase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression