Detail



ID : Ahg489706

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489706|fgenesh2_kg.6__2840__AT4G09040.1
Sequence
TCTTATCCAA AACTCTCTCA CTCATGGCTC TTCTTCGTCT TCCTGGCATT TCCCTCCAAA TTCTAGGTCA CAAATCAAAC CACAAGAACC CTAATCCCAA ATTCTCACTT ACCAATCACT CTCTCTCTTT CTCTACTTCT TCACTATGTC TTCTCAATCA TCACGCGACG TTTCCAGATT CAATTCCATC AAAATCCAGA AACTTCACCA CTTACTTCTC CGCCACAACA CAAGAGCCAG TCCTCGAATC TTCTTCTTCT TCAGCTACTG ATGTAGTAGA AGAAGAGATT TCTAAAACCA GATTAATTGC TCAGAACGTT CCTTGGACCT CTACACCTGA AGATATAAGG TCATTGTTCG AGAAATACGG CAATGTTATC GACATTGAGA TGTCTATGCA TAAGAAGGAA AGGAATAGAG GTTTGGTTTT CATTGAAATG GCTTCTCCTG AAGAAGCTGC AACAGCTCTT AAATCTCTCG AATCGTATGA TTATGAGGGT CGTCGTTTGA AGGTAGACTA TGCAAAGACC AAAAAGAAGA AGACATATGC GCCGCGTGAG AAGCCTTCAC CAGTGCCTAC ATTCAATTTG TTCGTTGCAA ACTTGGCATT CGAAGCAAGA GCCAAGCATC TTAAGGAGTT CTTTGATGCA GACACTGGTA ATGTTGTGTC CACTGAAGTT ATATTCCATG AAAATCCAAG GAGGTCGAGT GGTTATGGGT TTGTCTCTTT CAAAACCAAG AAACAGGCCG AGGCAGCACT GATTGAGTTC CAAGGAAAGG ATTTCATGGG AAGACCAATC CGATTAGCTA AAAGCAAACA GTTTGTGAAG TTGCAAGCAA AAGAAGGGTT GCAGCCACCG GAGGAGGAGG AGGAACCATC TCCTTCCGAG GCAATGACCC AAGAGGTTGA AACTCCGGCT GCATAAAACT GAGAAGTCTT TGTTGCAGGA TTATTACTGT GGATGTATTG GAATTGAAGA AAAAGCTTTT CTTCTTAGTT TTTGACCAAC AAGAGGAGTA GATACATACA AGTACCAACC TTGAGTAAAT GGTGGAGAAG TAAGTAAGAA GTACAAGACC GATTTTGTTA GAACTGAAAA CTAGTAGAGA CCGGTATACC AAACGTCAGT ATCAGACCAG ATCAAATCTC AAGAAACAAC CCCATGTGTC TCTGAGAAAC TTACTTTGTT AAGTTTAAAC ACAATGCTTC TTTGTTTGTC ATCTAGTTTC GATTGCTTGT TTTTGCGTTT GTTATATGTT TAGTGTGTAA 
Length1270
Protein Sequence
Protein Residue
Map Locationscaffold_6: 16817794.. 16820284
Download Sequence
A.thaliana
AGI-codeAT4G09040.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg485806 fructokinase-like 1
10.9087 Ahg937609 Nucleic acid-binding, OB-fold-like protein
10.9087 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
13.6382 Ahg495607 trigger factor type chaperone family protein
14.6629 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
14.7309 Ahg348440 chloroplast RNA-binding protein 29
16.4924 Ahg930074 proton gradient regulation 7
16.7929 Ahg477201 plastid transcriptionally active 17
18.3303 Ahg929218 Tetratricopeptide repeat (TPR)-like superfamily protein
21.8632 Ahg480562 high-affinity nickel-transport family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression