Detail



ID : Ahg478386

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478386|fgenesh2_kg.3__1087__AT3G10525.1
Sequence
AAGAAGTTTT CTCTCCATCC ACACAAAAAA AGTTTCCCAA ATAACAAAAC ACACACAAGT TTAGATATGG ATCTTGAGTT ATTACAAGAT TTGTCCAAAT TCAATTTCCC AACACCCATC AAGATCCGAT CCAAAACCTC AAAAACCAAG AAGGACGAAG GTGATGACGA CGAAGATGGC CTCAGCTGCA GCACACCCAC ATCCCAAGAA CACAAGATTC CCGCCGTCGT AGACTCTCCA CCTCCCCCGC CGCGAAAACC CCGACCACCA CCGTCAGCAC CGTCGGCTAC GGCGGCTCTG ATGATCAGAT CGTGCAAGAG GAAGCTTTTA GTGTCTACTT GTGAGATAAT CATGAATCGG GAAGAGATTG ACCGTTTCTT CTCCTCCGTA TACAATGAGA CGTCGACTAC GGCTAAAAGG CGGAGAAGTT ATCCATATTG TGCTCGAAGA TGAGGCTTAA TTCAATATTT ACATTTTTTA CAGTTTTACT GGAAATATTG TGAAATTAAT TTTATGTTGG TGTTTGATTT TAATATTTTT AATTTAATTA TGAATATGGA TGGATAATTT CCCTGCAACC GCATATTAAT TTCGCATGGA GGGGTCGATG TTGTAAATTG AGTAATAAAT GAAATTTAAT TCCAATTGCC AAGATTTCTA TAC 
Length663
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3959429.. 3960091
Download Sequence
A.thaliana
AGI-codeAT3G10525.1
DescriptionLOSS OF GIANT CELLS FROM ORGANS
TAIR curator summaryEncodes LGO (loss of giant cells from organs) required for giant cell formation. Giant cells in both leaves and sepals are absent in lgo mutants. LGO is a member of a plant specific cell cycle inhibitor family SIAMESE and was originally named as SMR1(SIAMESE RELATED 1).
Alias[LGO][SMR1][LOSS OF GIANT CELLS FROM ORGANS][SIAMESE RELATED 1]
Gene coexpression
MR
MR Locus Description
16.2481 Ahg472299 Protein kinase superfamily protein
16.5227 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
20.9284 Ahg946759
21.0238 Ahg328921 cytochrome P450, family 709, subfamily B, polypeptide 3
23.3238 Ahg472829 B-box type zinc finger protein with CCT domain
30.2985 Ahg493452 nuclear factor Y, subunit B3
33.0151 Ahg476696 ATP-dependent protease La (LON) domain protein
39.4968 Ahg481019 SMAD/FHA domain-containing protein
41.2553 Ahg491684 Translation initiation factor 3 protein
44.5982 Ahg483513 chloroplast outer envelope protein 37
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression