Detail



ID : Ahg472829

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472829|fgenesh2_kg.1__2783__AT1G25440.1
Sequence
GAGAGACACT AAATCTAACT TTTTGCAGAG AGCAAAAGAT TCAATTATTG AGATTGATCT CAAAATCAAA GCTCTCGTGC TCTTGTCGTT GATGTTGGTT TTTTAGAGTT TGTATACAAA GATGAAAAGT TTGGCGAATG CTGTTGGAGC GAAGACGGCG AGGGCTTGCG ACAGCTGCGT CAAGAGACGT GCGCGGTGGT ACTGCGCGGC CGACGATGCT TTTCTTTGCC AATCTTGTGA CAGTTTGGTC CACTCAGCGA ACCCTCTTGC TCGCCGGCAC GAGAGAGTCC GTTTGAAGAC GGCCAGCCCG GCGGTGGTAA AGCATAGCAA CCACTCATCA GCTTCTCCTC CACATGAGGC CGCCACGTGG CATCACGGGT TCACTCGTAA AGCTCGGACG CCACGTGGCT CTGGTAAGAA GAACAATTCG TCGATTTTTC ATGACTTGGT GCCGGAGATT AGTGTTGAGG ATCAGACTGA CAGCTATGAG CTTGAAGAGC AGCTGATCTG TCAAGTGCCG GTTCTAGACC CGCTGGTGGC TGAGCAGTTC TTGAACGATG TCGTTGAGCC CAAGATCGAG TTTCCGATGA TGAGAAGTGG TATGATGATC GAGGAGGAGG AAGACAACGC TGAAAGTTGT CTTAATGGTT TTTTCCCAAC CGACATGGAG CTTGAGGAGT TTGCTGCTGA CGTGGAGACT CTGCTCGGTC GCGGGTTAGA CTCTGAGTCC TATCCCATGG AGGAGCTAGG GTTATCTAAT TCAGAGATGT TCAAAATCGA AAAAGACGAG ATTGAAGAAG AAGTAGAAGA AAGAAAAGCC ATGAACATGG AAATATTCGA TGATGATCGA AAAGACGGGG ATGGGACAGT ACCGTTTGAG CTAAACTTTG ATTACGAGTC GTCACACAAG ACATCCGAAG AAGAGGTAAT GAAGAATGTT GAAAGTAGTG GTGAATGTGT TGTTAAGGTA AAAGAGGAAG AACAGAAGAA TGTTCTGTTG CTGAGATTAA ACTACGACTC GGTTATATCC ACTTGGGGCG GCCAAGGTCC ACCGTGGAGT TCAGGAGAGC CACCGGAGCG AGACATGGAC ATCAGCGGTT GGCCAGCCGT TTCCATGGGG GAGAATGGAG GAGAAAATAC TCATAAGAAG CAATACGTTG GTGGATGTTT ACCATCAAGT GGATTTGGAG ATGGAGGTAG AGAAGCTCGG GTTTCGAGAT ACAGAGAGAA GAGAAGGACG AGGTTGTTTT CTAAGAAGAT AAGGTACGAG GTACGTAAAC TGAATGCGGA GAAAAGACCA CGAATGAAAG GAAGATTCGT TAAGAGAGCC TCGCTCGCTG CTTCCGGTGC TGCAAATTCA CCATTAGGTG TTAATTACTG AATAGTGAAT ATCTATTCAT GTTATATCTC ACTTTACAAA TTTTGGTGAA CTTTTTTTCT TCTGAAACAA CAGAAGTTAT TTTGGCACTT AATTGTGTAT GTACATAGAT GTAACCAATA ATGTGACTTT TCTTGTATTG ATAGTACTGA TGTATATATT TGGTAATAAG AATGTGCAAA GGCATTTTGA TTGTTAAA 
Length1578
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11016167.. 11017859
Download Sequence
A.thaliana
AGI-codeAT1G25440.1
DescriptionB-box type zinc finger protein with CCT domain
TAIR curator summary
Alias[BBX15][B-box domain protein 15]
Gene coexpression
MR
MR Locus Description
4 Ahg926133 B-box type zinc finger protein with CCT domain
9.27362 Ahg470899 photosystem I subunit O
13.1909 Ahg475922 hydroxypyruvate reductase
13.4164 Ahg946256 nine-cis-epoxycarotenoid dioxygenase 4
15 Ahg477073 photosystem II subunit R
16.0624 Ahg480305 alanine:glyoxylate aminotransferase
17.088 Ahg492536 plasma membrane intrinsic protein 1;5
18.5472 Ahg487785 peroxisomal NAD-malate dehydrogenase 2
19.7484 Ahg493531 HXXXD-type acyl-transferase family protein
20.9762 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression