Detail


ID : Ahg478398

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478398|fgenesh2_kg.3__1099__AT3G10640.1
Sequence
CCTTGTTCTC CAAATTCTCG ATTTCTCTTT CTTCTTCCAA AGTCTTTTGT CTCTCTGTCT CATCCAAAAT TCCCAGATTT CTTCACGGAG TTAGAAGAAG AAGAAGATGA GGAGAGTTTT CGGCGCGAAG AAGAACACAG AGCCTCCTCC GTCCATTCAG GATGCCTCTG ATCGGATAAA TAAAAGAGGA GATTCGGTAG AAGATAAGAT AAAGAAGCTT GATGTTGAGC TCTTCAAATA TAAAGAACAG CTTAAAAAGA CAAGACCTGG TCCTGCTCAA GAAGCTGTCA AAGCTCGTGC TATGAGAGTT CTCAAGCAGA AGAAAATGTA TGAAGGACAA CGCGACATGC TCTATAATCA AACATTCAAT CTCGATCAAG TTTCATTTGC CGCTGAAGGA CTCAAAGATG CTCAACAAAC TATGACAGCA CTAAAATCTG CGAACAAGGA TTTGAAAGGA ATGATGAAAA CCGTCAAGAT TCAAGATATT GATAATTTGC AAGACGAGAT GATGGATCTG ATGGATGTTA GTTCTGAAAT TCAAGAAACA CTTGGTAGAA GCTACAATAT TCCTGATGGC CTTGATGAAG ATGACCTCAT GGGAGAGCTT GATGCTCTTG AAGCTGACAT GGGAAACGAG ACCGAAGCAG ATGGAATGCC TTCTTATCTC CAACCGGATA CAGAAACTGA TTACGATAAC GAGCTTAACT TGCCTGCAGC ACCAACAGGA CACAATGGAG CGCCACAGGG AAGAGTTCAG GCTGAGGACG AATTTGGATT ACCAGCAGTG CCACGAGCTT CTCTCCGGGG ATAAGTTCCA CCGATTCTCT TGTTGGGTGG AGCTACTAAG CTTTTATTTA GCCTTAGTGT CTTTATTCAT TTGTGCATAA CGTTTTTAAC TTTGATAAAC TTCCTTTTGG CTTTCTTATT GACTTCAAAA ATTGTCTTAT TTCATGTATC TCAGATTTCA TATTTTCTAT CATCAATAAC ACAAATGATG AGAATTTT
Length1008
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4009076.. 4010774
Download Sequence
A.thaliana
AGI-codeAT3G10640.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS60.1]
Gene coexpression
MR
MR Locus Description
15.2971 Ahg474438 Protein kinase superfamily protein
18.1384 Ahg937399 Tetratricopeptide repeat (TPR)-like superfamily protein
18.3303 Ahg480585 F-box/RNI-like superfamily protein
26.2679 Ahg920747 Calcium-binding EF-hand family protein
29.1548 Ahg494731 phosphatidic acid phosphohydrolase 2
30.2985 Ahg342616 AAA-type ATPase family protein / ankyrin repeat family protein
30.4631 Ahg356289 SMAD/FHA domain-containing protein
32.4037 Ahg908919 PEP1 receptor 1
33.6749 Ahg493128 PPPDE putative thiol peptidase family protein
36.606 Ahg488550 Target of Myb protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression