Detail



ID : Ahg480585

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480585|fgenesh2_kg.3__3286__AT2G17020.1
Sequence
GATCGCCACA ATTTCCGCAA TTTACTTGAT CAGGAAAGAG AGACTCCGAC GATGGTGACC ACCGTCTTAT GTGGCGGAGG AGGAGATGTT AACGGTTGCG ATGGAGATAG AAGCCTGGAT CTGTTACCGG CGGCTCTCTT GGAGACTATA ATGACGAAAC TCGACGTAGC GTCTCTCTGC TCGTTGGCTT CTACTTGCAA AACACTTAAG AGCTGTGTTA CTCGTGTCCT CACCTTCACT CCCAACTTCC ACATCTTCAA TGTTTCATTG TCAATGGAAA CTGTTAGACC ATTGTTGTTT CCGAATCAAC AACTCTCAAG TCTCAAGCTT GATTGTGGAA GACTTGGTAA TTCAGCTATT GATATATTGG TACGTCCTTC TCTGAGGGAG ATTTCTCTTC ACAATTGTCG GGATTTCAGC GGCGATCTAA TCTCTGAAAT CGGGAGGAGA TGCAAGGATT TGAGGCTCCT ATGTTTGGGT TCAGTGGCGG AGAAAGTTGG TCGAAGTATT AGCCGTTGTG CTTTCGAAGA TTTACTAAAC GGTTGCTCCC ATTTAGAGGT CTTAGCACTC ATGTTTGACC TCTCATTGTA TCTGCGTCCT GGTGATGGTC GCATTTTTGG ATTGGTATCT GATAAATTGA CTCATCTGGA GCTAGGACAC ATCTCGTCAA GGATGATGAC TCAACTACTT ACATCAACTG AAATCTCGGG GCAAGACAGC AGCCGGGTTA CATCTACTGT GCTACAAAAT GTCCAGCAGT TGCGCCTCTC AGTGGATTGT ATTACTGATG CTGTGGTTAA GGCGATATCG AAATCTCTTA CGTCGTTGAT AGATTTGGAC ATAAGAGACG CGCCTCTTGA GGATCCAAGG CAACTATCAG ACCTCACGGA TTTTGGGCTT CATGAGATCA ATCAAAACGG TAGGCTGAAG CACCTCTCTC TAATCCGTAG TCAGGAGTTT CACCCTACTT ACTTCCGGCG AGTTAGTGAT CAAGGAATGC TTTTTCTTGC TGACAAATGC TTGGGCATGG AAAGCATTTG TCTTGGTGGC TTTTGTCGGG TAACAGATGC TGGTTTCAAG ACTATTCTTC ACTCTTGCGC TAGTCTCTCC AAGTTTAGCA TATATCATGG ACCTAAATTG ACGGATCTTG TCTTCCATGA CATCTTAGCA ACTACTTTAT CGCTTAGTCA TGTTTGCTTA AGAAGGTGCC ATCTTCTTAC GGACCACGCA ATTCAAAAGC TGGCGTCAAG TCTCAAGCTG GAGAATCTTG ACCTCAGAGG GTGCAGAAAC CTGAGGGATG GAACCTTAAA AGCTGTGTCT CATCTGCCAA AACTGAAGGT TTTACTTCTT GATGGCACCG ATATTAGCGA CACAGGGCTT TCTTACCTAA AAGAGGGAGT TTTGGACTCC CTAGTTTCTT TATCTGTCAG AGGGTGCAGA AATTTAACAG ATAAGTTCAT GTCTACCTTA TTTGACGGAT CCTCAAAACT GGTGCTGCGT GAACTCGACT TGTCTAATCT TCCTAATTTA ACGGATGCTG CCATTTTTGC TCTAGCAAAA TCTGGAGCCC CAATCACAAA ACTGCAACTA AGAGAGTGTA GACTCATAGG GGATGCCTCA GTCATGGCTC TTGCATCTAC ACGGGTTTAT GAAGACGAAT GTCCTGGAAG TAGCTTGTGT TTGTTGGATC TTTACGACTG TGGAGGCATC ACACAACTCT CATTCAAATG GCTAAAGAAA CCATTTTTCC CGAGGCTTAA ATGGTTAGGA ATCACAGGAA GTGTAAACAG AGATATCGTA GATGCTTTGG CAAGGAGACG ACCACATTTA CAGGTCTCAT GCCGTGGAGA AGAGCTGGGG AATGATGGGG AAGACGACTG GGACTCTGCA GACATACACC AACACATAGA AGCACAAGAA GATGAGCTTG AACAGTGGAT TCTTGGAGAT GAAGGTGATG TTGAAATGGA GGACGCAGAA GATGAGAGTG AAGAAGACGC AAGTGAAGAA GACTGATAAA TCTGAAACTA TATGGGTAAA CACCAATTCT CTTAATCTTT ACTTTAGGTT TTAATTTTTT TTATGTTCTC TTTTTTTTTT CTTAGCTCTT GTGGTTATTG TTGTTGGTGT TATTGTTGTT GTTGTTGGTG ATGTTGTTGT TCTAATCATC TCATGTTTCT TTAACTTTGG TCTTGATTAT TTGAATAAAG GATATCTAGA GATTGTGATG TGT 
Length2233
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20564781.. 20567260
Download Sequence
A.thaliana
AGI-codeAT2G17020.1
DescriptionF-box/RNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg482185 hydroxyproline-rich glycoprotein family protein
10.4881 Ahg491814 Regulator of Vps4 activity in the MVB pathway protein
11.0454 Ahg486560 SEC7-like guanine nucleotide exchange family protein
12.49 Ahg485028 methyl-CPG-binding domain protein 5
15.1987 Ahg482239
18.3303 Ahg478398 SNF7 family protein
21.0713 Ahg492485 Leucine-rich repeat (LRR) family protein
25.4558 Ahg493386 Mitochondrial substrate carrier family protein
27.3861 Ahg475389 FAD/NAD(P)-binding oxidoreductase family protein
35.4965 Ahg481200 myb domain protein 70
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression