Detail



ID : Ahg478543

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478543|fgenesh2_kg.3__1244__AT3G11940.2
Sequence
GTCCTCTTAA AGCTTATCGT TTTCTCTGCC GTCTCTCTCA TTCGCGCGAC GCAAACGACC TTCAGCCATG GCCACCGCCG CAGATGTTGA CGCTGAGATT CAGCAGGCGC TCACTAACGA GGTCAAGCTC TTCAACCGCT GGACCTATGA CGACGTTACG GTCACAGACA TCAGTCTTGT TGACTACATT GGAGTTCAGG CAGCTAAACA TGCTACCTTT GTTCCCCACA CCGCTGGAAG ATACTCTGTG AAGAGATTCA GGAAGGCGCA GTGCCCCATT GTTGAGAGGC TCACCAACTC TCTCATGATG CATGGGAGGA ACAACGGTAA GAAATTGATG GCAGTGAGGA TCGTCAAGCA TGCCATGGAG ATTATCCACC TCTTGTCTGA CTTGAACCCA ATCCAGGTCA TCATTGACGC CATTGTCAAC AGTGGTCCAC GTGAAGATGC TACCAGAATT GGATCTGCTG GTGTTGTTAG GAGACAAGCT GTTGATATCT CTCCTCTAAG ACGTGTTAAC CAAGCTATCT TCTTGATTAC CACTGGTGCT CGTGAAGCTG CTTTCAGAAA CATCAAGACT ATAGCTGAGT GCCTTGCTGA TGAATTGATC AACGCAGCCA AGGGCTCTTC CAACAGCTAT GCCATCAAGA AGAAGGATGA GATTGAAAGA GTTGCCAAGG CCAATCGTTA AGGATTTTCC TTTTGCCTTG AGGGTTACAA TCTTATCAAT GAGTTTAATG TTTTATCTTC ATTTAGATTG AAATATGTAT CTCAGATGTT TTGCTCTTTT GTTTTATGAA GTTTATTTCG TCCGAACTAC TTTGAATAGA TAAATTTT 
Length838
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4540693.. 4542170
Download Sequence
A.thaliana
AGI-codeAT3G11940.1
Descriptionribosomal protein 5A
TAIR curator summaryOne of two genes encoding the ribosomal protein S5. Mutants have semi-dominant developmental phenotypes. Most cell-division processes are delayed or disturbed in the heterozygous mutant, and development is completely arrested at an early embryonic stage in the homozygous mutant.
Alias[AML1][ATRPS5A][RPS5A][ARABIDOPSIS MINUTE-LIKE 1][ribosomal protein 5A]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg496177 GTP binding Elongation factor Tu family protein
7.07107 Ahg483266 Ribosomal protein S5 family protein
8.48528 Ahg929678 receptor for activated C kinase 1C
12.2474 Ahg942428 Ribosomal protein S24e family protein
12.2474 Ahg926602 40s ribosomal protein SA
12.8062 Ahg944893 Cytosol aminopeptidase family protein
15.2971 Ahg491293 Ribosomal protein S14p/S29e family protein
15.6525 Ahg488362 Ribosomal protein S4
17.4356 Ahg941581 Ribosomal protein S8e family protein
18.3303 Ahg487866 Ribosomal protein S6e
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression