Detail



ID : Ahg478629

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478629|fgenesh2_kg.3__1330__AT3G12690.1
Sequence
TGCTTCCTTT TCGAGAAAAC GTTGCAATTC AACTGGAAAC ATCAGTTTCT CCGTTGGTCA GAAGCAGAAG AAGAGGGAGA GACCAGTTTC TTCGGTTTGA TTATCCTCAG CTTGTCTTTT ACATCAGCAA GGAAGCGTGA TCATTTCAGG TAAAAGGTTA GCTACTTTAT AACGGAAGAA GAATCATTAT CAACCTGGAG ATATTCCGAA TATGGACTTA GCTTCCAAGA AGAACACAGC TAATGTTGGC TCCAAGGAGG TAGACCCATT CGTAAAACCT AAGTCGCCTC GTACAAGCCT CTCTCCATTT TCACTTAAAC TAGGAGACAA TGTTCCCCGA AACCCTTATT TCGATCCCAA GAAGATGGAT CCTCTCGTTA AACATCAACC GATAAAGTCT CATGAACCTC CCACCGCGAC TAGAGGGACC AATAGCGAGG GTGATTTAAA GCATAACACC TATTCTAGCG ATGGTGATAG CTTAGCAATG CGGAAGAATG CTCCTAAAAA TCTTCATTAT GATCCCAAAA AGATTGTTCC TTTAACCACA TCTGAAACAT ACTCCCCAAG CGCCAGAAAT CATCACCACC ACAGGACTAA GTCCCCAGAC AACAAGAGAG CCCCTAGACA TAATGGGGAC TATGCATATG GTGATAACTT GGTGGGTCCA TCAGCTACAC CTTTCAAGCC TCACACGGGA GGGGACGTGA GGTGGGATGC TATTAACTCA ATCGCTTCAA AAGGCCCTCA AATAGGTCTC GACAACTTCA GGCTTCTGAA ACGTCTAGGG TATGGGGATA TAGGCAGCGT TTATCTTGCA GACCTGCGAG GGACAAATGC GGTTTTTGCG ATGAAGGTGA TGGATAAGGC CTCTTTGGCC AGCAGAAACA AGTTGCTGAG GGCACAGACC GAAAGAGAAA TCCTATCCCT GCTTGATCAT CCTTTCTTGC CGACTCTCTA TTCTTACTTT GAGACCGATA AATTCTACTG TTTGGTCATG GAGTTCTGCA GCGGCGGAAA TCTCCATTCA CTCAGACAGA AGCAACCCAG CAGGCGTTTC ACAGAAGAGG CCGCGAGGTT CTACGCGTCT GAAGTGCTAT TGGCTTTGGA GTATCTGCAC ATGCTGGGGG TTGTGTACAG AGACTTAAAG CCAGAGAACA TCCTTGTTCG AGATGAAGGC CACATAATGC TCTCTGACTT TGACCTCTCC CTCCGTTGCA CCTTTAATCC GACCCTCGTT AAGCCCTCCT CAGTCTGCAG CGGAGGAGGT GCTATCCTCA ACGAGGAGTT TGCTGTCAAT GGCTGCATGC ATCCATCCGC CTTTCTCCCC CGCCTCCTCC CTTCCAAGAA AACCCGTAAA GCCAAATCAG ATTCCGGCCT CGGTGGCCTC TCTATGCCGG AGCTCATGGC AGAGCCAACA GATGTGCGGT CAATGTCCTT TGTGGGCACA CACGAGTACC TGGCTCCAGA GATCATTCGT GGCGAGGGAC ATGGCAGCGC TGTGGACTGG TGGACATTCG GGATCTTCCT TTATGAGCTC CTCCATGGGA CCACCCCGTT CAAGGGGCAG GGAAACAGAG CCACGCTGCA CAATGTAGTG GGTCAGCCGC TGAAGTTCCC GGATACCCCG CATGTGAGCT CAGCGGCACG TGATCTCATC CGTGGACTTC TAGTGAAGGA TCCTCACAGA AGGATCGCTT ACACGCGGGG AGCCACAGAG ATAAAGCAAC ACCCTTTCTT TGAAGGAGTG AATTGGGCTC TAGTGCGTAG TGCTTCCCCG CCTCACATTC CCGACCCCGT GGACTTGGGA CCGTACGCGG CCGCTAGAGG GAAGGCAAAG AGCCATGGAG TTGGTGATCA CTGTAACTCA ATTAAGCCGG AGCCTCTGGT CGCCTGTGCT GCTGGTCCCA CGGATGATAC GGCGTATATA GATTTCGAGT ACTTTTAGAC TTAAACTCCA CAAGCTGAAA GTTTCTATAT GTTTCTTTTT GTTCATATTC TTTAATTTTT GACGAATACA AATTGTGATT TATAAAAGAA GAACAAATGA CTTGATTTAA GAGACAAAGA TTCCATGAGT TTTACTAATA GAGTTAAAGC AG 
Length2102
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4802091.. 4804849
Download Sequence
A.thaliana
AGI-codeAT3G12690.1
DescriptionAGC kinase 1.5
TAIR curator summaryEncodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes.
Alias[AGC1.5][AGC kinase 1.5]
Gene coexpression
MR
MR Locus Description
16.4317 Ahg949223
21.4942 Ahg919553 DNA ligase 1
23.8118 Ahg495765 histone acetyltransferase of the GNAT family 2
24.5357 Ahg348875 Disease resistance-responsive (dirigent-like protein) family protein
27.3313 Ahg495654 RNA-binding (RRM/RBD/RNP motifs) family protein
28.9828 Ahg482874 galacturonosyltransferase 7
28.9828 Ahg470804 Tetratricopeptide repeat (TPR)-like superfamily protein
29.9333 Ahg925100 RNA helicase, ATP-dependent, SK12/DOB1 protein
29.95 Ahg485480 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)
36.9865 Ahg478740 mitogen-activated protein kinase kinase kinase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression