Detail



ID : Ahg478704

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478704|fgenesh2_kg.3__1405__AT3G13224.1
Sequence
CAGATCTTAT CAAAACCCTA GCTTTCGGTT TCTCTCTCGA TCCTTAGCTC GGAGAATTTC TCAATCGAAA ACTGTATTAG GAGCTACCAT GGGTTCCAGA TCTCGTAATG ATAATTTCCA GTCCGGCGAT GGCGCTAGTC CTGGGAAAAT ATTCATTGGA GGATTGCACA AAGACACGAC CAATACTGTG TTCAATAAGC ACTTTGGCAA GTACGGGGAG ATTACAGATT CTGTCATTAT GCGTGATCGA CATTCTGGAC AACCTAGGGG TTTCGGTTTC ATCACCTTTG CTGACCCTTC TGTCGTTGAC AAAGTTATCG AAGATAATCA TATCATCAAT GGCAAACAGG TTGAGATCAA AAGGACTATT CCAAAAGGTG CTGGCGGCAA TCAGTCTAAG GATTTCAAAA CAAAGAAGAT TTTCGTTGGT GGTATACCCT CCACTGTTAC AGAAGATGAA CTTAAGGACT TCTTTGCCAA GTATGGGAAC GTGGTGGAGC ACCAGGTTAT CCGAGACCAT GAAACAAACA GGTCCAGAGG TTTTGGTTTT GTTATTTTTG ACAGCGAAGA AGTCGTAGAT GAATTATTGT CCAAAGGAAA CATGATCGAT ATGGCAGACA CTCAGGTAAG CTTGTACAAA TGGGGCCTAG AATTGTGGTA CATGCACACA TATATATCTT GGTTTCAGTT TGTAATTTTC TGCTTGTTTC TTTCATTATA CACGTTTAAC TTATTTAGAA TTCTACCCTC TAGCTTACCA AATGTAAGGA GGTTGTCACA GTAAGCTAGG AAGTCCCTGC TATAGTTTGG ATCCTTAGCA TAGCTAGGTT AATTAAGTTG CTTTGTTGTA GGTGGAGATC AAGAAAGCTG AACCAAAGAA ATCTCTAAAC CGTTCACCTC CTTCTTACGG TAGTCACCCT AGAGGTCGTT CTTCTAACGA TAGTTATGGC GGTTATGGTG GACCTTACGG AGGTTTTGAT GGAGGTTATG GTCCTCCAGG TCCCATTAGG TCACATGGAG GTCCTCCTAG TAGGTTTGCT GGGGGATATG GGTATGGTCG TGGCGGTGTA GGCCCTGAAT TTGGAGGAGG ATATGGTAAT TATGGGGGTG GTAGTTTAGG AGGTTACCGG AATGAACCAC CCCTTGGCTA TTCTAGTCGT TTTGGACCCT ATGGGAATGG GTTTGGTGGC GAGGGATATG GTCGTGGAGG AGGGGAAGGC TATGGGGCAT ATGGTCGTGG AGGTGGGGAA GGCTATGGGG GATATGGTGG GCCTGGTTAC GGTGGTGCAT ATGAATCTGG TGGCCCAGGT GGCAGTTATG AAGGAGCAGG TGGTCCATAT GGGAGGGGTT ATAGTAGCAG TAGTCGATAC CATCCGTATG CAAGATAGGG TCGAGGTAAT AGCAATCAAT AGAAGCTATA GAAGCTTCTC TCACAGGTTT CTCTAGATTG TTCCAATCGC TCTAGGTGCA TTCTAGAGTT ATCATGTAGC GCCAACATCA GGAAGGATTG CTAAGGACAG GAAGAGCATC AAAAAACTTT TATTAGACAT CTTTTAGTGT GTGTTTACCT AATTTAAGTG TTGTCTTATC TCTTTAACTT AGATTGTGTT ATGTAGACTT TAGAATATTT GGGTTTGGAG TTTGTTTCTC ACTGGCACAA GAATAATTTA TCATTTGGTA GTCTTGTTAG ATGATCAATC ACTCGCTTAG CTTAGGTTTG CACAATCATA CGAATTAGCT AAAGAAGCTC GGCAAAATGT GCATTCATCT ATTCTTTAGA GCTCAAGTTA AACTTTATGT GGTGTCTTCT TATCTCTGTA GATTTTGTTG TTCCGAACAA AGGTTCGAGG GCAGTTAGTG TATGTGTAAG TAAGTAGGCA TATTTTTGTC AGCTGCGTAC GTAGGTTCTA GCTACAAATT GGAATTGTAT ATGTTTTAAA ACGAATGTTT TTGAAAATTA TCTATATAAG CATGGTTATT ATTTGGTTTT TGTTTCCTTA TTTTTTAGGG TAAGGACCAC GGATATTTTG TTTGAGATTC GTTGTTCTGA TAATGTGGAT TTTGTTATCT ATAATTTCTC ATTAAAATGA TTACATTTTA GTTTGTATCA TTAAATAAAT TTCACATTGT ACATGCTTTT AGAAGTTAAT 
Length2150
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5040722.. 5043441
Download Sequence
A.thaliana
AGI-codeAT3G13224.2
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg494461 Cyclin family protein
7.61577 Ahg944648
9.8995 Ahg470813 ER-type Ca2+-ATPase 1
10.4881 Ahg486933 Got1/Sft2-like vescicle transport protein family
11.0454 Ahg349596
11.7473 Ahg478437 AZA-guanine resistant1
13.0767 Ahg489733 OSBP(oxysterol binding protein)-related protein 1C
17.5784 Ahg478821 Small nuclear ribonucleoprotein family protein
19.6214 Ahg482625 Aldolase superfamily protein
26.7395 Ahg945854 Actin-like ATPase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression