Detail


ID : Ahg478821

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478821|fgenesh2_kg.3__1522__AT3G14080.1
Sequence
TTCGATCGGA TCTGGGTTCT ATATTTTTTT TGAAGAACCC GAGTCCGTTT TCGATCAGTC TCGCGTTCGA TAGCCAAATA TTATCTCTTC AACTGAAATC TGAGGAACAT TATTATTATC GGTTTGTGTT TTATAGAAAG ACCGAAACTT TTCATCAAAT TTCAAGCGGA TAGAGTCAGT GGCGATGTCT TGGGCTGGTC CTGAAGATAT TTATCTTTCA ACCTCACTCG CTAGTTATCT CGATAGAAAA CTACTTGTGC TCCTTAGAGA TGGTAGAAAG CTAATGGGAA TACTCCGTTC CTTTGATCAA TTCGCCAATG CGGTTCTAGA AGGTGCGTGT GAGAGGGTAA TTGTTGGTGA ACAATACTGT GACATTCCTT TAGGCCTCTA TGTAATCCGT GGAGAGAATG TTGTTTTGAT TGGTGAGCTG GACACGGAGA GAGAAGAGCT TCCGCCGCAT ATGATTCGTG TCTCAGAGGT AGAGATTAAG AGGGCCCAAA AGGTGGAGAG AGAAGCGAGT GAGCTGAGAG GAACAATGAG GAAGAGAATG GAGTTTCTCG ACTTTGATTA AACCAGATTG TATCCCCATT CATTATTGGC CTGATGCTCT GCTTTGGCTC GCAAGTTTTA TGATGAGCCT TTTTGGTGTG TTGACTTAGG GGATCGACGC AAGTCTTATG TTTCATTTGG GAAGAACATG ACAGAATAAT CTGTGTACTT CTTCGGATTT ATTTATCTTT TTAAGAGAAA AATATTTAGC AATTTCTTTC
Length770
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5523822.. 5525523
Download Sequence
A.thaliana
AGI-codeAT3G14080.1
DescriptionSmall nuclear ribonucleoprotein family protein
TAIR curator summary
Alias[LSM1B][SM-like 1B]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg937917
17.5784 Ahg478704 RNA-binding (RRM/RBD/RNP motifs) family protein
24.5561 Ahg488439 NAD(P)-binding Rossmann-fold superfamily protein
27.6225 Ahg488454 Regulator of chromosome condensation (RCC1) family protein
34.5543 Ahg479567
43.4051 Ahg912327 ARM repeat superfamily protein
44.587 Ahg488367 Ribosomal protein L27 family protein
50.2792 Ahg924869 translocase of the inner mitochondrial membrane 13
54.4426 Ahg490568 ARM repeat superfamily protein
58.9576 Ahg475515 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression