Detail



ID : Ahg478718

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478718|fgenesh2_kg.3__1419__AT3G13350.1
Sequence
AGGAAAAATA AAATCTTAAA TACGGTCGTC TCAATTGCTC TTACCTTTAC CAAGACGGCC AAAAGAAAAG ATGTCGACCG ATATTTCACC CTACTCTCAA ACTCACGTGG AGCCCGTTAA TGGTTATCCT TCAGACAACA AGCGATGCGA CGATTCCTCT GCTCCTGCCA AATATGATGA TCTTGTCCGT AACTCTTCTC TCTTCTGGGA TAAGCTCCGA GCTGTTCTCG GACTAACCAG CCAAACTTTG AAGGTTCCTA CTGTGGGAGG GAACACTCTT GATCTGCATC GGCTTTTCAT TGAGGTTACG TCTCGAGGTG GTATCGAAAG GGTGGTTAAG GATCGGAAAT GGAAAGATGT GATTGGTGCA TTCAGTTTTC CGACAACGAT AACAAGTGCA TCGTTTGTCT TGAGGAAGTA TTATCTCAAG TTTCTTTTTC AGCTGGAACA TGTGTATTAC CTTGAAAAAC CAGTGTCTTC GATCCAATCA ACAGATGAAG CAATGAAGAG CCTTGCCAAT GAATCTCCAA ATCCTGAGGA AGGTATTGAT GAACCACAAG TTGGGTATGA GGTTCAAGGA TTCATTGACG GGAAGTTTGA TAACGGCTAT CTGGTGACGA TGAAATTGGG TTCTCAAGAG CTGAAAGGTG TGATTTACCA CATTCCTCAA ACGCCAAGTC AGTCCCAACA AACCATGGAA ACAGCTTCAG CCACTGTACC ATCATCACAA CGCCGGCATA GGAAGAAATC AAAGTTGGCT GTCGTCGATA CTCAGAAGCC CAAATGCCAC AGGAGTGGCT ACAACTTCTT TTTTGCTGAG CAGTACGCTA GGCTTAAACC TGAGTACCAT GGACAAGAAC GAAGCATCAC CAAGAAAATA GGACACATGT GGAGCAACCT CACTGAATCT GAGAAACAGG TTTATCAAGA CAAAGGAGTT AAGGATGTGG AGAGATACAG AATTGAGATG TTGGAATATA AGTCTTCACA TGAGTCAGGA GCTGCTGCTT CTACAGTGGC TCAGTAGCTT TTCTCCCTTT TGTTGTCTTA TGTGTTTGTT GTAACATTGT CTTTTTCTCT ATAAAACTTG TTTTTTTTTT CTTTCTTTTA GTAGTGATTT CTATGAGTTG CAGAATTTGC CATGTTTATT ATGGCTTTAG AGCTAGTGAG GAGGTTACTA ACTGCGAACT AGTGTCTCTC TTGTTGTTTC CTTTTTAGCA AGTGCCATTT TGTAGTACGG GCATAGCCAT ATATCCAGAT CTTTCTTC 
Length1268
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5109705.. 5115036
Download Sequence
A.thaliana
AGI-codeAT3G13350.1
DescriptionHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.23607 Ahg486495 casein kinase II beta chain 3
5 Ahg476906 beta-galactosidase 16
11.4891 Ahg483034 Microsomal signal peptidase 25 kDa subunit (SPC25)
18.1108 Ahg495055 Xanthine/uracil permease family protein
19.3907 Ahg920821 NAP1-related protein 2
20.1246 Ahg477260 CASC3/Barentsz eIF4AIII binding
21.166 Ahg484013 Lung seven transmembrane receptor family protein
24.2487 Ahg471723 CASC3/Barentsz eIF4AIII binding
24.6982 Ahg330455 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
24.7386 Ahg933989 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression