Detail



ID : Ahg486495

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486495|fgenesh2_kg.5__2487__AT3G60250.2
Sequence
TAAAAAAGAA AACCCTAGAT TTCTCCGTCT CTTTCCTTTC TCTCAAGCTT CTCAGAAAGT CTGACACTTT GAGAATCTAA TCTCCAAAGT TATTGTCTTT TGGAGGAATT ATGTACAAGG AACGTAGTGG AGGAGGAGGT GGGTCATCGA GATCGGAGAT CCTCGGTGGA GCTATTGATC GGAAACGAAT CAACGATGCA CTCAATAAGA AACTAGAGAA ATCTTCAACT CCCACCACCA CATCTAGGGT TTTCTCTTCT AAAGACAAAG ATCCCTTTTC ATTCACATCT ACTTCCACTG CTAAATCTCA GCTCCCCGAT GTGGAATCGG AAACTGATAG TGAAGGGTCA GATGTGAGTG GATCGGAAGG TGATGATACA TCGTGGATCT CTTGGTTTTG TAATTTGAGA GGGAATGATT TCTTCTGTGA AGTCGATGAA GACTATATTC AAGATGATTT CAATCTTTGT GGATTAAGTG GTCAAGTTCC TTACTATGAG TATGCTCTTG ATCTCATTTT AGATGTGGAA TCTTCCAACA GTGAGATGTT TACTGAAGAA CAGAATGAAA TGGTGGAATC AGCTGCTGAA ATGCTATATG GTCTTATTCA TGTTCGTTAC ATTTTGACTA CTAAAGGAAT GGCTGCAATG ACTGAGAAGT ACAAGAACTG TGATTTCGGG AGATGCCCGA GAGTTTTCTG TTGCGGTCAG TCTTGTCTTC CAGTTGGACA ATCCGATATC CCGAGATCGA GTACTGTGAA GATATACTGC CCAAAATGCG AGGACATATC TTACCCGCGA TCTAAATTCC AAGGCAATAT TGATGGAGCA TACTTTGGAA CCACATTCCC TCACTTGTTC TTGATGACTT ACGGGAACTT AAAGCCGCAG AAACCGACTC AAAACTACGT CCCAAAAATC TTTGGCTTCA AGGTACACAA ACCATGATAC TAGTGCTCTA CTTTCTCAAT GGTGATACAT CTAGTGGCTC GGTAATTGCA TCCGGATGAG CAACAACTGA AACGATAGCT GCGGTTTGAA TGGAGCATAC ATCAATCATT GGGTGAAGTT GATAGATGGA ATCCTGAAAG GAGGATCTCA TGAAGTTCCA AGAAAACTTA TAAGTGCAAC AGCCTGGCTC ATTGGGGGTA AAGAATGTCT CCCAAAAGAT TTTCCCCTGT TAGTTGGATT TTGTTTTAAC TGTTGAATTA TTATTTGTTT TCCTAATTTC ATGTAAAACT CATAAATTG 
Length1249
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18689331.. 18691069
Download Sequence
A.thaliana
AGI-codeAT3G60250.1
Descriptioncasein kinase II beta chain 3
TAIR curator summaryRegulatory (beta) subunit of the protein kinase CK2. Involved in regulation of the circadian clock in Arabidopsis
Alias[CKB3][casein kinase II beta chain 3]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg478718 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
6.32456 Ahg473553 Smg-4/UPF3 family protein
11.0454 Ahg490606
14.9666 Ahg491433 Homeodomain-like protein
18.4391 Ahg488259 Proteasome component (PCI) domain protein
19.2094 Ahg480549 multimeric translocon complex in the outer envelope membrane 132
25.6515 Ahg477582 NAD(P)-binding Rossmann-fold superfamily protein
29.3258 Ahg331786 CLUB
33.4963 Ahg481599 C2H2 zinc-finger protein SERRATE (SE)
33.6749 Ahg313056 Preprotein translocase SecA family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression