Detail



ID : Ahg478719

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478719|fgenesh2_kg.3__1420__AT3G13380.1
Sequence
AAAATAAGAC AAGATCTCAT TCACTTCTTC TTCTTCTTTA ATTTCTATCT TAAGCTGTCA CGAGAAAAAC AGAGAATTTC TCATCTCATT TTGTCAAGCA AAAACCAAAA AAAAAAAACA CTCCTTTTTT GTTTCCGGGA AAATTCGTTT TTATGTAGTG GTCGTACTAA ACACGCTTCC TTTATGTGGA ATGTTAAAGC AGCCCTTTAT TTTGGTTGAA TTCAACAGTT TCTTTTTTTT TTGGTTGAGG ATCCGACCAT CTCTGCAACA TCGTACTTTG GGAGACAACA CTGTCGAAGA CCATCTCCGT TGTCTTCTTC ACTTGGAGAA CTCTCTCTCT CTTCTCTGTA CTTTCTCCTT TCTCTTTTTC CGTATCTGTC AGCCTTTGAT TCCGCTTTTT TTGTTTCTTC ACAATCTTCA CCACATATAC ATTGTTGCAA GCTCTTCTCC GGTGAAGCCT TTGGTTGTTA TGGCGGAAAG GGTTTTCTCT CCATACCCAA AAAGAAGATT CTTGAGCTTG AAATTGCAGT CTTTAGGCTG ATGATTTCTT AAGGGAATTT TATCGAACAC TTGGTGGGCT AAAAACATGA AACACCAATG GCAGCTCCTG ATCCTCTGCT TGCTCGTCTT GTTTCTAACG GTGGACGGCC GTGGCAGACG GCTACTCAGC GACGATGTTA GCGACGCAGC TCTGTTAACA ACGTTCAAGC AAATCTCCGT TAAGTCGGAT CCTAACAACT TTCTGGGTAA CTGGAAATAC GGGTCGGGTC GTGACCCATG TTCTTGGCGA GGCGTCTCTT GTTCTAGCGA TGGTAGAGTC ATTGGACTTG ATCTACGAAA CGGTGGCCTT ACCGGAACCC TAAATCTCAA TAATCTCACG GCGTTGTCGA ATCTCCGGAA TCTTTATTTG CAAGGAAACA ACTTCTCGTC GGGGGACTCC TCTGGTACTT CTTCTTCTTC AGGATGTTCT CTCGAGGCTC TGGATATATC TTCAAACTCG ATTACGGACT CTTCAATGGT GGAATACGTT TTCTCTAGCT GTTTGAATCT GGTTTTTGTC AATTTCTCGC ACAACAAGCT CGCCGGAAAA TTAAAGTCTT CTCCGTTGAC GAGTAACAAG AGAATCACCA CCGTTGATCT CTCCAACAAT CGCTTCTCCG ATGAGATACC GGAGACTTTC GTCGCCGATT TCCCGACGTC TCTGAAACAC ATCGATTTAT CCGGTAGCAA TTTCACCGGC GACTTCTCTC GTCTCAGTTT TGGTCTCTGT GGGAACCTCA CCGTATTCAG CTTATCACAG AACAGCATCT CCGGCGACAG ATTTCCGGTT AGTCTCTCAA ATTGTAAGCT CCTCGAAACG TTAAACCTCT CTCGGAACAG TCTCGCCGGA AATATTCCCG GCGATGAATA TTGGGGAAAT TTTCAGAACC TGAAGCAGCT CTCCCTCGCA CACAACCTTT ACTCCGGTGA GATTCCACCG GAGCTTTCTC TGCTATGTCG AACTCTAGAG GTTCTCGATC TCTCCGGCAA CAGTCTCACC GGTCAGCTTC CGCAATCATT CACCTCCTGT GGCTCACTAC AAAGCCTAAA TCTTGGAAAC AACAAGCTCT CCGGCGATTT CTTAAGCACC GTCGTGAGTA AACTCTCTAG AATCAGTAAT CTTTACTTAC CCTTCAACAA CATCTCCGGT TCTGTTCCGA GTTCGCTCAC CAACTGTACT AATCTCCGAG TTCTTGATCT GAGCTCAAAC GAGTTCACTG GAGAAGTACC ATCTGGCTTC TGCTCTCTTC AAAGATCTTC GGTTCTGGAA AAGTTCCTTA TTGCCAACAA TTACCTCTCA GGAACTGTTC CTGTTGAGCT TGGTAAATGT AAGAGCTTGA AGACAATTGA TCTTAGCTTC AATGCTCTCA CTGGTTCAAT TCCAAAGGAG ATATGGACAT TGCCGAATCT CTCTGATTTA GTTATGTGGG CGAACAATCT CACCGGTGGA ATTCTGGAGA GCATTTGTGT TGATGGAGGA AACTTGGAAA CGTTAATCTT AAACAACAAT CTCTTAACCG GTTCTGTTCC AGAATCAATC TCCAAATGCA CCAACATGCT TTGGATCTCC CTTTCTAGTA ACCTGCTTAC CGGCGAAATC CCGGTAGGAA TCGGAAAGCT TGAGAAGTTA GCGATTCTGC AACTTGGGAA CAATTCTTTG ACTGGGAACA TTCCACGTGA GCTTGGAAAC TGCAAGAACC TTATCTGGCT TGATCTTAAC AGCAATAATC TAACTGGGAA TCTCCCAGGT GAACTTGCAA GCCAGGCCGG ACTGGTAATG CCCGGAAGCG TCTCTGGTAA ACAGTTTGCG TTTGTGAGGA ACGAAGGTGG GACGGATTGC AGAGGTGCAG GGGGTTTGGT TGAGTTTGAA GGCATTCGTG CAGAGCGGTT AGAGCATTTT CCGATGGTTC ATTCATGTCC CAAGACTCGG ATATACTCAG GCATGACCAT GTACATGTTC TCCGGGAACG GGAGCATGAT CTACTTGGAC CTCTCCTACA ATGCGGTTTC AGGTTCTATT CCTTTGGGTT ATGGTGCAAT GGGATACCTT CAGGTCTTGA ATTTGGGACA TAACCTGTTA ACTGGAACCA TACCGGATAG CTTTGGAGGA TTGAAAGCAA TTGGAGTTCT TGATCTATCT CACAACAATC TCCAAGGATT CTTACCTGGA TCACTAGGAG GACTCTCTTT TCTAAGCGAC TTAGACGTCT CTAACAACAA TCTAACCGGA CCAATCCCAT TCGGAGGCCA ACTTACGACG TTCCCAGTCA CAAGATACGC CAATAACTCT GGCCTCTGCG GGGTTCCTCT GCCACCCTGT AGCTCTAGTT CCCGGCCCAC GAGATCTCAT GCTCACCCTA AAAAACAGAG CATTGCGACT GGGATGATCA CTGGAATTGT GTTTTCTTTC ATGTGTATTG TGATGCTTAT TATGGCGCTT TACAGAGTAA GGAAGGTTCA GAAGAAGGAA AAACAGAGAG AGAAGTACAT CGAGAGCCTT CCGACCTCCG GTAGCAGCAG CTGGAAGCTC TCTAGCGTTC ATGAACCGTT GAGCATCAAC GTCGCAACCT TTGAGAAGCC GCTGCGAAAA CTTACTTTCG CACACCTTTT AGAAGCCACA AACGGGTTTA GCGCTGATAG TATGATTGGA TCAGGCGGGT TTGGAGATGT CTACAAGGCT CAACTCGCTG ATGGATCTGT TGTAGCGATC AAGAAGCTGA TTCAAGTCAC GGGACAAGGT GATAGAGAGT TCATGGCAGA GATGGAAACG ATTGGAAAAA TCAAACATCG AAATTTGGTG CCTCTTCTTG GATATTGCAA GATTGGTGAA GAGCGACTTC TTGTCTACGA GTACATGAAA TACGGAAGCT TAGAGACCGT TCTACACGAA AAGACCAAGA AGGGTGGAAT CTTTCTTGAT TGGTCCGCGA GGAAGAAGAT TGCAATTGGA GCTGCGCGTG GGCTAGCTTT CCTGCACCAT AGCTGCATTC CTCATATAAT CCACAGAGAC ATGAAGTCAA GCAACGTTCT TCTAGACCAA GATTTTGTAG CCCGTGTCTC AGATTTTGGT ATGGCAAGGC TGGTGAGCGC TCTGGACACA CACTTGAGTG TTAGCACTCT CGCGGGTACT CCCGGATATG TTCCACCAGA GTATTACCAG AGTTTCCGGT GCACTGCAAA AGGAGATGTA TACAGCTACG GAGTTATACT TCTGGAGCTC CTCTCAGGCA AGAAACCGAT CGATCCAGAA GAGTTTGGTG AAGACAACAA CCTTGTGGGA TGGGCTAAAC AACTCTACAG GGAGAAGAGA GGAGCCGAGA TTCTTGACCC AGAGTTAGTG ACAGACAAAT CTGGCGATGT TGAGCTACTT CATTACTTGA AGATTGCGTC TCAATGTTTG GACGATCGGC CGTTTAAAAG GCCAACTATG ATTCAAGTCA TGAAGATGTT CAAAGAGCTC GTTCAGGTCG ATACAGAGAA CGATAGTCTG GATGAGTTTT CGCTCAAGGA AACGCCGTTG GTCGAAGAAT CACGAGATAA GGAGCCTTGA GGAATTCAGG AAGATTTGAA TTTGGTTATT TTCTTCCTAT TTTTGTTGTT AGTGATTCAG TGTATATAAC AGTAAAATGG AATGACAGAC GCCGACACTG AAGGTTTTTT AAGCTATAGA GAAATACTTC GTTGTAAAGT TTTTGTACCT AACAAATTAA TCTTAGCGTA AT 
Length4262
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5139330.. 5143722
Download Sequence
A.thaliana
AGI-codeAT3G13380.1
DescriptionBRI1-like 3
TAIR curator summarySimilar to BRI, brassinosteroid receptor protein.
Alias[BRL3][BRI1-like 3]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg929511 phospholipase D P1
12.3288 Ahg481938 WRKY DNA-binding protein 25
17.088 Ahg475116 WRKY family transcription factor
20.7846 Ahg485546 Clathrin light chain protein
26.3059 Ahg483624 histone mono-ubiquitination 1
27.0555 Ahg481925 UDP-Glycosyltransferase superfamily protein
27.6586 Ahg899104 Tetratricopeptide repeat (TPR)-like superfamily protein
29.3428 Ahg322779 Protein of unknown function (DUF707)
32.3728 Ahg938459 mitogen-activated protein kinase phosphatase 1
35.4965 Ahg926817 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression