Detail



ID : Ahg478902

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478902|fgenesh2_kg.3__1603__AT3G14860.2
Sequence
AAAAGGAGAA AAAAAAAAAC TGTTGTCATC TGCAAATTGG TTTCATTCTA TCAGTTGTTG TTGTCTTGGA ATATGTAAAT CGTCTCCTCT AGGGTTCGAT TCCAACTTCA ATTGTACTTT GGAAGCTACA GAGAAAGAGA TGGGCAAATC TCAGATTCTT CTACTCGCTG AGAGCTTTAC TTGTTCTCTA AAGACTTTGT TCACTTTATG GATCGTCTTC ACCTTTCCAT TTCAAGCTCA AGCTGCTCCT TCTGGTTCTT TGATTAAGCA CATGTCCTGG GTTCTCAAGT GGACTACTGG ATCATCCTCT AAAATATCCC AATCAGACAC TAATGTTCTT CAGTTTGAGA ATGGTTACTT GGTCGAAACT GTTGTCGAAG GAAACGAAAT CGGTGTTGTT CCTTACAAGA TTCGAGTTTC TCATGATGGT GAACTTTATG CTGTTGATGA ACTTAATAGC AACATCATGA AAATCACTCC TCCCTTGTCA CAGTACAGCA GGGGAAGGTT GGTGGCTGGA TCGTTTCAAG GAAAGACGGG ACATGCAGAT GGAAAACCAA GTGAGGCTCG TTTTAATCAT CCGAGAGGTG TAACAATGGA TGACAAAGGG AACGTTTATG TCGCTGATAC TTTGAATCTC GCCATCCGAA AGATTGGAGA TTCAGGTGTT ACTACGATAG CTGGAGGGAA ATCTAATATA GCTGGGTATA GAGATGGACC AAGTGAGGAT GCAAAGTTCT CAAATGATTT TGATGTTGTA TATGTTCGGT CTACTTGCTC GCTGCTGGTC ATTGACAGAG GAAATGCGGC TCTTCGCCAA ATCTCTCTCA GCGAAGAGGA CTGTGACTAT CAAGATGATA GCTCAATCTC TCTAACTGAT ATACTCTTGG TTATTGGTGC TGTTCTCATT GGTTATGCTA CTTGTTTGCT CCAGCAGGGT TTTGGAAATT CTTTCTTCTC AAAGACGCAG CTAGAATCAG AAACCAGCTT TGAAGAGGAG CATCCAGGCA AAGAGAAACT CTCCCGACCT GTCCATGAGA CAAAAGTAAC CAAGGAAGAA CCTGGTTGGC CATCGTTTGG GCAACTCATT ATTGATCTCT GCAAACTCGC TCTCGATTTT ATAACCAGCC ACCTAGTTCC AACCCGATTC ACAACCAGCC ATAATCTAAG GCCATTAAAA GATAGACTCA AAATGCCTGA AGACGAACAA GAACCACCTC GAGTCCAAAG GCATACTGCC CCAGCACCAA TCTCTGAATC GCGACATGCC CACATGCCTA AAGCTGATGA TAGTTACCCG GAACATAAGA CCCCAAAGCT AAGATCAAGT AGTGTAATGA AGGACCCTGC TTTGTCAGCA TCCAAGCACC ACCGGTCATC ATCAAAACGG CAGGACTATG CTCAGTTCTA TGCCTCAGGA GAGGTTACCC CACCGAAGAT CCATAAAGAG CGATCAAGGC GTCGCCATAG AGATAAAACA ACCGAAACGG AACCAAAGCT AACAACATCA GATACGGTGA AGCCTGTAGA GTACAGTAAT AGTTCAAAGT TTGATCATTA CAACATGAGG AGCAGCAAGT ATGGACCTGA AACTCCATTT CGATTCTAGA AAGTAAAATC ACATCCTCAT CAGAACCCTT TTCTGAGTAT GTTGTGCCCT TTCTTTGGTC CTTACTTTGG GGAGATTCAT TATGTTTTCT TTTTGTTAGT TACTAAGAAA ATCTTATTAC ACAGATGAAG AAAAAGAAGT TAAAAGGCTT TTCTTGTAAC GAAGGATTGA TGAATCATTA CTGAAACTCT GATTTCTTTT GAACTT 
Length1816
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5879970.. 5882574
Download Sequence
A.thaliana
AGI-codeAT3G14860.2
DescriptionNHL domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.0416 Ahg488305 shaggy-like kinase 13
13.6382 Ahg477486 general regulatory factor 7
14.8324 Ahg488965
17.4929 Ahg919663 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein
18.7083 Ahg943679 F-box family protein
34.0588 Ahg471107 sucrose transporter 4
44.0227 Ahg934119 transcription activators
45.7275 Ahg950456 xylose isomerase family protein
45.8367 Ahg932754 Leucine-rich receptor-like protein kinase family protein
52.3832 Ahg488222 SU(VAR)3-9 homolog 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression