Detail



ID : Ahg488305

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488305|fgenesh2_kg.6__1439__AT5G14640.1
Sequence
CTCTCTCTCT GCCATCAGAA GAAAAAGAGA GATTTGCCAT TTTCGGCAAG GAAGAGTCTT TTATTCTAGG GTTTCTCTAG TTGCTGCTGC GTAAACAAGA TGGTGAACTG AAATTGCGGC GGAGACTTTT CAGACAGATT GACGAATTGA ATCAAAGTTC TTGAATATGG CTTCTGTGGG AACATTACCG GCTTCTTCTA TGGCTACAAA ACAAAGCAAT GCTTCCATAT GCGCTGAAAA ACTACCTGAA GGGATTAATG AGATGAAGAT AAAAGATGAT AAGGAAATGG AAGCAGCTGT GGTTGATGGG AATGGAACTG AAACAGGTCA CATTATTGTT ACAACTATTG GTGGTAAAAA TGGTCAGCCT AAACAGACCA TAAGTTATAT GGCAGAGCGC ATCGTTGGAC AAGGTTCTTT TGGAATTGTT TTTCAGGCCA AGTGTTTAGA AACGGGGGAA ACTGTTGCAA TCAAGAAAGT TTTGCAAGAC AAAAGATACA AGAACCGTGA GCTGCAGACG ATGAGGCTTC TTGATCACCC TAATGTTGTA TCCCTCAAGC ATTGTTTTTT CTCAACGACC GAAAAAGATG AGCTGTATCT CAATTTGGTC CTTGAATACG TTCCTGAGAC TGTATATCGC GTCTCAAAGC ACTACAGTCG GGCAAACCAG AGGATGCCCA TGATATATGT TAAACTCTAC ACTTATCAGA TTTGCAGAGC TTTGGCTTAT ATTCATGGTG GAGTAGGAGT CTGCCACAGA GACATAAAAC CACAGAATCT TCTGGTTAAT CCTCATACGC ATCAAGTCAA GCTCTGCGAT TTTGGTAGCG CAAAAGTTCT GGTCAAAGGC GAACCAAACA TCTCTTACAT CTGCTCCCGT TACTATCGAG CGCCTGAACT TATATTTGGA GCCACAGAGT ATACGACAGC TATTGACATA TGGTCTGCAG GCTGTGTTCT TGCTGAATTG CTCCTTGGTC AGCCTTTATT TCCAGGTGAG AGTGGAGTCG ACCAGCTAGT CGAGATAATT AAGGTTCTTG GAACACCAAC CCGGGAGGAA ATCAAATGCA TGAATCCAAA TTACACTGAA TTCAAATTCC CTCAAATAAA GGCTCATCCT TGGCACAAAA TATTCCATAA GCGTACACCT CCAGAAGCTG TAGACCTCGT CTCAAGACTT CTCCAGTATT CTCCAAACCT CAGATCAACC GCTATGGAGG CGATAGTTCA CCCGTTCTTC GATGAGCTAC GTGATCCCAA TACACGTCTT CCTAATGGTC GCCCATTGCC TCCTCTCTTC AACTTTAAAC CTCAAGAGCT AAAAGGAGCA AGTTCAGAGT TGTTTTCCAA GCTTATACCT GACCACGCCA GAAAACAATG TTCCTTCCTC GCTCTCTAAA TCTCTCTCTC TCTCTCTCTC TCTCTATATA TATATATATA TGTGTGTATG TACACATGCA TATATAAGTA ATGGAGATAG CTTCTCAGGA TTTCTTTGTT GTTTATTGTA CTTTATTACA TTCGATGATT AGTGTAATGT ATGTAACGGT CTTTGACTGG GCTGGTCGCT GCAGTTATGT TGGATACTTC TAAATTATGA AATAACCTTC TCGCTCCTCA CGTGTC 
Length1626
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5683834.. 5687061
Download Sequence
A.thaliana
AGI-codeAT5G14640.1
Descriptionshaggy-like kinase 13
TAIR curator summary
Alias[ATSK13][SK13][SHAGGY-LIKE KINASE 13][shaggy-like kinase 13]
Gene coexpression
MR
MR Locus Description
1 Ahg478382 NAC domain containing protein 52
1.73205 Ahg935279 IQ-domain 14
3.16228 Ahg474628 Sec14p-like phosphatidylinositol transfer family protein
5.65685 Ahg472374 Target of Myb protein 1
5.74456 Ahg486233 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
5.91608 Ahg486176 autoinhibited Ca2+-ATPase 11
6.16441 Ahg478354 Reticulon family protein
6.9282 Ahg472806 decapping 5
7.74597 Ahg479762 FRIGIDA-like protein
8.12404 Ahg332000 U-box domain-containing protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression