Detail



ID : Ahg479012

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479012|fgenesh2_kg.3__1713__AT3G15610.1
Sequence
GAATTTTCGG GAAGCAGCAT TTCCACTGGA GCTGCAATAA TCTTCCTATC AAAATTATAG ATCGATCCAA GTTTTAGATT CGAGAAAATT TTTCTCCAAA TTAAATAGAC AGGAATTTTT GTTTTGTCGG ATGAATTTTA GCGCCAATTT TACCACTGAA TCGTTTGATT AGAAGCAGCG ATTTCGTCTT AGGATCGATC AAATTAGGGT TCTTCTTCTT CTTCTTCGTT GTCGTTAAAA TTAGTAAAAA GAGATGGAGA AGAAGAAAGT AGCGACTCCG CTAGTGTGCC ATGGCCATTC GAGACCTGTT GTGGATTTGT TCTACAGTCC AATCACACCT GATGGTTTCT TCCTCATCAG CGCAAGCAAA GATTCTCATC CAATGTTGAG AAATGGGGAA ACTGGAGATT GGATTGGTAC ATTTGAAGGG CATAAAGGTG CTGTGTGGAG TTCTTGTTTG GATAACAACG CTTTACGTGC AGCTTCTGCA TCTGCTGATT TTTCAGCGAA ACTTTGGGAT GCTTTGACCG GGGATGTGTT GCATTCTTTT GAGCACAAGC ATATTGTTCG AGCATGCGCC TTCTCTCAGG ATACGAAATT TCTAATCACA GGAGGATTTG AGAAAATTCT TCGTGTTTTC GACTTGAATC GCTTGGATGC ACCTCCTACA GAAATTGATA AATCTCCTGG TTCTATCAGA ACACTAACTT GGCTTCACGG TGATCAAACC ATATTAAGTT CTTGCACTGA TATTGGCGGT GTGAGGTTAT GGGATGTGAG GAGTGGCAAA ATTGTGCAAA CTCTAGAAAC CAAGTCTCCT GTCACCAGTG CTGAAGTGAG TCAAGATGGA CGGTATATCA CAACTGCCGA GGGATCAACT GTTAAATTTT GGGATGCAAA TCATTTTGGA CTAGTGAAGA GTTACGACAT GCCCTGCAAT ATCGAATCTG CGTCGCTTGA GCCTAAATCT GGCAACAAGT TCGTTGCTGG TGGAGAAGAT ATGTGGGTTC GACTCTTTGA TTTCCACACG GGAGAGGAGA TTGGATGCAA CAAGGGACAT CATGGTCCGG TTCACTGTGT GAGATTTGCA CCAACAGGTG AGTCTTATGC TTCAGGGTCT GAAGATGGTA CAATCAGAAT CTGGCAAACT GGTCCGGTGA ATCCTGAAGA GAACAGTGAA TCAAAACCGA AGCAGAGTGT GGATGAGGTT ACTCGTAAGA TTGAAGGCTT TCACATTAAC AAGGAAGGGA AAACCGCAGA GAAACCATCT GATGCTTAAA CCAAGAAATG AACAACAACA AAAATGGCTG CTTCTCTTGT CTTCTTACTG TGTTTTTACT TCCAGACTGA ATATACGGAA ATTTAAAACA A 
Length1371
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6224925.. 6226980
Download Sequence
A.thaliana
AGI-codeAT3G15610.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.8632 Ahg482625 Aldolase superfamily protein
30.348 Ahg928205 germin-like protein 8
31.1769 Ahg950116 HSP20-like chaperones superfamily protein
44.0454 Ahg485090 RING/U-box superfamily protein
45.9783 Ahg347271 Domain of unknown function (DUF298)
49.3559 Ahg484373 Regulator of chromosome condensation (RCC1) family protein
50.9902 Ahg481154 N-acetyl-l-glutamate synthase 1
51.1468 Ahg912460 Aluminium activated malate transporter family protein
53.1977 Ahg479734 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
53.4977 Ahg491287 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression