Detail



ID : Ahg479225

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479225|fgenesh2_kg.3__1926__AT3G17470.1
Sequence
GCCTCAATTT CAAAATCAAA TCTCAAATTC TCAAATGTCT GTGATTCGTC CTTCTCCGAT TCCAATTCCA AGATGCAGAT CCCAGTTGCT GCATCGTCGT CTTTACTCGA TCCAATTGAT TCAGAGACGA CGTCGACGGT GGAATCCGAG GTCAGAGGTG GAGGATACTG CGGTTGAATC GACGGCTCGG TCTCCGGAGG CAGCGGGAGG GAAAATGGTT GTGGAGCTAG TTGGAGCTTT CAACGAAGTA ACGGAGAGGA TGAATTCGGT TTGGTTGTCA ACGTCTTCGT CTAGGTTACT CTTTAAAGCT CTGAAGCTCT CAATTCCGAT TTTACAGTCT CTTCCTCTTG CCTCTGATGG TCGCTCTCCT CTTTCTAAGG CTCTTTCACT CTCTATCATA CTCGCAGATC TCCAGATGGA TGCGGAAGTT ATATCGGCGA GTATATTGAG TGAGGTGGTG GAGGCGAATG CGATATCTAT ATATGAAGTT AGAGACCAGA TTGGTACTGG AACTGCTCAT CTGCTTCATG AGATTTTTCG TGTTAAGAAC ATCCCTTTTA AAGTTGATGT CTTGGACGAT GAAACTGCTG CTTCATTGAG AAAGTTCTAT TTAACCTACT ATGACATCAG AGCTGTGACC ATGGATTTGG TTTCAAAGCT TGATGAGATG AGGCATTTGG ATCACTTGCC AAGGTATCGC CAGCAGATTC TCTCTCTCGA AGTGTTGAAG ATTTATTCTC CTTTAGCTCA TGCGGTTGGG GCTAATCACC TGTCTCTTGA GCTCGAGGAC ATATCTTTCC GTTATCTTTT CCCGTGTTCG TATCTATACT TAGATTCATG GTTAAGAGGT CACGAGAACG GGTCTAAACC GTTGATAGAC ATGTACAAAG AGCAGCTTCA TCAGTCTTTG AAGGCTGATT TGGTTTTGGC TGAAATGGTG GATGATGTAT ATATTAAAGG TCGGTATAAA AGCCGGTACA GTATGATGAA GAAGCTCTTA AGAGATGGGC GTAAACCGGA AGAAGTGAAC GATGTGCTTG GTCTACGGGT CATATTGATG CCGAATTCTG TAACAAACGA TGTTGAAGTG GGTGAAAAAG CCTGTTACAG AACAAGTGAG ATTATCCGGT CTTTGTGGAA GGAGATTCCG CATAGAACAA AAGACTACAT TGCTAGGCCG AAGGCAAATG GGTATAGGAG TTTACACATG GCAGTTGATG TTAGCGACAG CGATCAGACG AGACCTTTGA TGGAGATACA AATACGGACA ATGGATATGG ATGGATCCGC TAATGCTGGA ACAGCATCAC ATTCTTTGTA TAAAGGCGGT CTAACCGACC CAAAAGAGGC GAAGCGGCTT AAAGCAATAA TGATGGCAGC AGCAGATCTT GCAGCAATTC GTCTGAAAGA TCTCTCATCA AATAAACACC AAAGCTTCAA GACAACAATG AACCAGAGAG ACAGAGTGTT TTGCCTTCTG GACAAAAACG GGGACGGAAT GATCAGCATA GAGGAACTAA TGGAAGTGAT GGAAGAGCTT GGAGCTCCAG GTGAAGACGC AGAGGAAATG ATGCAGCTTC TTGACTCTAA CAGCGATGGA TCTCTTAGTT CAGACGAATT CGATACGTTC CAGAAACAAG TAGAGTTCAT GCGTAAATGG GAAGATAGAG ATAACGAGTA CAAGAGTCTT TTAGACGAGA AGCTTCATGA TCTCCCACAT CAAGATACCA CAGGTTTGAT ACAGTTATAC AATAAAGAGC TTGAAGATCG TCTCTCAACC CATTAAATAT CAAACCATTT TTCTAAAATC TAATAT 
Length1816
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7034558.. 7036673
Download Sequence
A.thaliana
AGI-codeAT3G17470.1
DescriptionCa2+-activated RelA/spot homolog
TAIR curator summary
Alias[ATCRSH][CRSH][Ca2+-activated RelA/spot homolog]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg944731 ascorbate peroxidase 6
13.784 Ahg484159
16.2481 Ahg471910 cationic amino acid transporter 8
17.6068 Ahg476410 Homeodomain-like/winged-helix DNA-binding family protein
23.1733 Ahg483019 Subtilisin-like serine endopeptidase family protein
25.02 Ahg933866 TRAF-like family protein
28.4605 Ahg471271 S-domain-1 13
28.7228 Ahg945443 elongation factor P (EF-P) family protein
41.1096 Ahg483757 Nuclear transport factor 2 (NTF2) family protein
42.8135 Ahg334100 lactoylglutathione lyase family protein / glyoxalase I family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression