Detail


ID : Ahg471271

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471271|fgenesh2_kg.1__1225__AT1G11350.1
Sequence
GGATTAATAC AAGCCATATA GCTCTGCGTT TCTCTCAGAC TTCCTGAGAA GATGGGTTGT TTGTTTATTC TTCTTCTTAC TTTGACTTGC TTTTCCTTGA GGCTTTGTTT GGCAACTGAT ACAATCACGT TTTCTAGCGA GTACAGGGAC TCTGAGACTG TCGTCTCCAA CCACAGCACC TTCAGGTTTG GTTTCTTCAG CCCGGTTAAT TCCACTGGAC GTTATGCAGG GATATGGTTC AATAACATTC CTGTTCAAAC CGTGGTTTGG GTAGCAAACA GGAACAGCCC GATCAATGAC TCTTCCGGAA TGGTTGCCAT ATCCAACGAA GGGAATCTTG TGGTTATGGA TGGTCGTGGA CAGGTTCACT GGTCCACCAA TGTCTCGGTG CCGGTGGTTG CTAACACCAC CTATGCCCGG TTGCTGAATA CAGGGAACCT TGTGCTGCTA GGAACTACTA ACAGTGGGGA TGAGATTCTT TGGGAGAGCT TTGAGCATCC TCAAAACATT TATTTGCCAA CAATGAGACT TGCTACTGAC GCGAAAACAG GGAGGAGCCT TAAGCTAAGA TCTTGGAAAA GCCCGTCTGA TCCATCGCCT GGACGATACT CTGCAGGTTT GATTCCTCTG CCATTTCCAG AACTTGTCGT CTGGAAAGAT GATCTTCTGA TGTGGCGTAG CGGTCCGTGG AATGGTCAAT ACTTCATTGG GTTACCAAAT ATGGATTACC GTATCAATCT TTTCGAGTTA ACCCTTAGTA GTGACAATCG AGGATCTGTC TCCATGTCCT ATGCTGGAAA TACATTGCTG TATCATTTTC TCTTGGACTC CGAAGGAAAC GTGTTTCAGA GAGATTGGAA CTTGGCTATG CAAGAATGGA AGACCTGGTT AAAGGTCCCA TCGACAAAGT GTGATACATA TGCCACATGT GGCCAATTCG CTAGTTGCAA ATTCAATTAC GGGTCAACTC CGCCTTGCAT GTGCATTAGA GGGTTCAAGC CACAGAGTTA CGCGGAGTGG AAGAACGGAA ACTGGACTCA GGGATGCGTA AGAAAGGTGC CATTGCAGTG CGAAAGACGA GACAACAACG ATAGAAGTAG AAAAAGTGAT CGATTTGTGA GAGTGCAAAA GATGAAAGTG CCCCACAATC CACAACGATC TGGAGCAAAT GAACAAGACT GTCCTGGGAA CTGTCTGAAG AACTGTTCTT GTACGGCTTA CTCATTCGAC AGAGGGATTG GGTGTCTTCT TTGGAGCGGA AACTTGATGG ATATGCAAGA GTTTTCGGGC ACTGGTGTGG TTTTTTACAT TCGTCTCGCA GATTCAGAAT TCAAAACGCC GACCAATCGA TTAATTGTGA TCACAGTAAC TTTGCTAGTA GGTGCTTTTT TGTTTGCAGT GACTGTTGTC TTAGCACTGT GGAAGATCGT TAAGCATAGA GAGAAGAACA GAAACACAAG GCTACTGAAT GAGAGAATGG AAGCTTTATG TAGTAGTGAC GTTGGTGCAA TCCTTGTGAA TCAATACAAG CTTAAAGAGC TACCACTGTT CAAGTTCCAA GTGTTAGCAG TGGCGACTGA CAATTTTTCA ATCACAAACA AACTCGGACA AGGAGGATTT GGTGCTGTTT ACAAGGGGAG GTTACAAGAA GGGCAAGAGA TCGCTGTGAA GAGGCTTTCG CGAACATCGG GACAAGGAGT CGAGGAGTTT GTGAATGAAG TGGTCGTGAT CTCTAAGTTG CAACACCGGA ATCTCGTGAG ATTGCTTGGT TTCTGCATTG AAGGAGAAGA GAGGATGTTG GTCTATGAGT TCATGCCAGA GAATTGTTTA GACGCATTTC TATTTGACCC GGTGAAGCAA AGACTTCTTG ACTGGAAGAC GCGGTTTACC ATAATCGATG GGATTTGCAG AGGTCTTATG TACCTTCACA GAGATTCAAG GCTGAAGATC ATACACAGAG ATTTAAAAGC AAGCAATATC TTGTTAGATG AGAATCTAAA CCCGAAGATA TCCGATTTTG GGCTGGCTAG GATTTTCCAG GGGAATGAGG ATGAAGCAAA CACCCTAAGA GTGGTTGGAA CATACGGTTA TATGGCACCT GAATACGCAA TGGGAGGGTT GTTCTCAGAG AAATCTGATG TTTTCAGCTT AGGAGTCATA CTTTTAGAGA TTGTGAGTGG AAGAAGAAAC TCAAGCTTTT ACAATGATGA GCAGAATCCA AATCTTTCAG CTTATGCATG GAAACTCTGG AACGACGGGG AAGATATTGC TCTCGTGGAT CCGGTCATCT TTGAAGAGTG TTTTGAAAAT GAAATACGCA GATGTGTGCA CATAGGACTC TTGTGTGTAC AAGATCACGC AAATGATAGA CCGAGCGTTG CAACGGTGAT TTGGATGCTA AGTAGCGAGA ACTCCAACCT TCCAGAGCCA AAGCAACCCG CATTTATACC TAGAAGGGGC ACTTCAGAAG TTGCATCCTC AGGGCAAAGC GACCCAAGTG CGTCAATGAA CAATGTGAGC CTCACAAAAA TAACAGGACG TTAGCTCTGT AAGTGAGATA AACCTACTAC TAAAGAATTT TTATGACAGA TTGATTAAAT TGTACATCTA TATATATGAT GTGTAAGAGT AATCTATAGG ATAAGAACT
Length2649
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4351145.. 4354333
Download Sequence
A.thaliana
AGI-codeAT1G11350.1
DescriptionS-domain-1 13
TAIR curator summary
Alias[CBRLK1][RKS2][SD1-13][CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE][S-domain-1 13]
Gene coexpression
MR
MR Locus Description
9.27362 Ahg496053 copper transporter 1
15.1987 Ahg328921 cytochrome P450, family 709, subfamily B, polypeptide 3
19.0526 Ahg472299 Protein kinase superfamily protein
19.975 Ahg473497 GT-2-like 1
22.1133 Ahg471270 S-locus lectin protein kinase family protein
23.0651 Ahg483545 Protein of Unknown Function (DUF239)
24.3721 Ahg491684 Translation initiation factor 3 protein
25.2982 Ahg893150 beta-6 tubulin
26.2679 Ahg484057 Auxin efflux carrier family protein
26.6083 Ahg489770 Drug/metabolite transporter superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression