| Annotation |
|---|
| Description | jgi|Araly1|479492|fgenesh2_kg.3__2193__AT3G19760.1 |
| Sequence |
AAGCATTTGG GGAAAATCGA TTGAAAACCC TAGGAGAGAG AAAACAAAAA ATCTAGACGG AGACTAATGG CGACAGCGAA TCCTGGCCGT GGAGGTGGTA GAAGAGGCGG TGGACCTATG GATGACGATA AGCTGGTGTT CGAGACGACG GAAGGGATCG AGCCCATCAC TAGCTTCAAT GATATGGGGA TAAAGGAAGA TGTGCTTCGC GGTGTTTACG AGTATGGATT CGAGAAGCCT TCCGCGATTC AGCAGAGGGC TGTGATGCCG ATTCTTCAAG GACGCGATGT TATTGCTCAA GCTCAGTCTG GTACCGGGAA GACATCTATG ATTGCTCTCT CCGTTTGCCA AGTTGTTGAT ACTTCTTCTA GAGAGGTTCA GGCCTTGATA TTATCCCCAA CAAGAGAGCT GGCTACACAA ACAGAGAAGA CGATACAAGC TATTGGATTA CACGCCAATA TTCAGGCACA TGCTTGCATC GGTGGGAAGA GTGTTGGAGA AGACATCAGG AAGCTGGAGC ATGGTGTTCA TGTTGTGTCT GGGACACCTG GTCGTGTCTG TGACATGATA AAGAGGAGAA GTCTTCGTAC CAGAGCTATT AAACTTCTGA TTCTTGATGA ATCAGATGAA ATGCTGAGCA GAGGGTTCAA AGACCAAATC TATGATGTTT ACAGATATCT TCCACCAGAT CTTCAGGTTT GCCTGGTTTC TGCAACCCTT CCTCACGAGA TTTTGGAGAT GACATCTAAG TTTATGACGG AGCCAGTGAA GATACTTGTG AAGCGTGATG AGTTGACTCT TGAAGGAATC AAACAATTTT TTGTTGCTGT TGAGAAAGAG GAGTGGAAAT TTGATACACT CTGTGATCTT TATGACACAC TTACTATCAC TCAAGCTGTT ATCTTCTGCA ATACAAAACG AAAGGTGGAT TATCTAAGTG AGAAAATGAG AAGTAACAAC TTCACTGTCT CATCAATGCA CGGGGACATG CCTCAGAAGG AGAGAGACGA GATCATGAAT CAGTTCCGGT CAGGTGAAAG TCGTGTTTTG ATCACAACTG ATGTATGGGC ACGTGGGATT GATGTGCAGC AAGTTTCTCT TGTCATCAAT TATGATCTCC CCAACAACCG TGAGCTGTAC ATCCATCGTA TTGGACGGTC TGGTCGATTT GGGCGTAAGG GTGTTGCAAT CAACTTTGTT AAAAGCGACG ATATCAAGAT CCTTCGAGAC ATTGAGCAGT ACTACAGTAC CCAGATTGAT GAGATGCCAA TGAATGTAGC TGATCTTATC TAAAAGAAGA GCTTGTCTGA GGTTTTTTGC TTTCAGCGGG AAGTGTCTGG ATGAGAAGAA GTATTGTTGA GAGCTTCTGT CAAATTATTG CACTATCTTA TGGTGTGGTT CCTTTTGATG TTTCTGTGGG CTCTTTTGAA CAAACTTAAA ACTCGCGTGT GGTAAATTTA TAATGACTTA AGAAGCGATT TAGGATTAGG GTTTGGACCT TCTGGTTTTT TTTCCCTCGT AATTGATTTT GGG |
| Length | 1533 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 8066794.. 8069632 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G19760.1 |
| Description | eukaryotic initiation factor 4A-III |
| TAIR curator summary | Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles. |
| Alias | [EIF4A-III][eukaryotic initiation factor 4A-III] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg311385 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 5.91608 |
Ahg473387 | SCAMP family protein |
| 9 |
Ahg487429 | LETM1-like protein |
| 9.16515 |
Ahg930021 | Transducin/WD40 repeat-like superfamily protein |
| 9.94987 |
Ahg919991 | heat shock protein 70 (Hsp 70) family protein |
| 10.9545 |
Ahg489809 | calcium-dependent protein kinase 4 |
| 11.3578 |
Ahg479524 | T-complex protein 1 alpha subunit |
| 11.4018 |
Ahg322384 | Prolyl oligopeptidase family protein |
| 13.4164 |
Ahg491921 | DNAJ heat shock family protein |
| 18.9737 |
Ahg488163 | Ubiquinol-cytochrome C reductase iron-sulfur subunit |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|