| Annotation |
|---|
| Description | jgi|Araly1|930021|scaffold_302478.1 |
| Sequence |
GAGAGAGAGA ATTTCGAGTG ATGTCGAAGA TAACGTTAGG GAACGAGTCA ATTGTTGGGT CTTTGACTCC ATCGAACAAG AAATCGTACA AAGTGACGAA TAGGATTCAA GAAGGGAAGA AACCTTTGTA TGCTGTTGTT TTCAACTTCC TTGATGCTCG TTTCTTCGAT GTCTTCGTTA CCGCTGGTGG TAATCGGATT ACTCTGTACA ATTGTCTCGG AGATGGTGCC ATATCAGCAT TGCAATCCTA TGCTGATGAA GATAAGGAAG AGTCGTTTTA CACTGTAAGT TGGGCGTGTG GCGTTAATGG GAACCCATAT GTTGCGGCTG GAGGAGTAAA AGGCATAATC CGAGTCATTG ACGTCAACAG TGAAACGATT CATAAGAGTC TTGTGGGTCA TGGAGATTCA GTGAACGAAA TCAGGACACA ACCTTTGAAA CCTCAACTTG TGATTACTGC TAGCAAGGAT GAATCTGTTC GTTTGTGGAA TGTTGAAACT GGGATATGTA TTCTGATATT TGCTGGAGCT GGAGGTCATC GCTATGAAGT TCTAAGTGTG GATTTTCATC CTTCTGATAT TTACCGTTTT GCTAGTTGTG GTATGGACAC CACTATTAAA ATATGGTCGA TGAAAGAGTT TTGGACATAC GTCGAGAAGT CATTCACATG GACTGATGAT CCATCAAAAT TCCCCACAAA ATTTGTCCAA TTTCCTGTAT TTACAGCTTC GGTTCATACA AATTATGTAG ATTGTAACCG TTGGTTTGGT GATTTTATCC TCTCAAAGAG TGTGGACAAC GAGATTCTGT TGTGGGAACC ACAACTGAAA GAGAATTCTC CAGGAGAGGG AGCTTCAGAT GTTCTATTAA GATACCCGGT TCCAATGTGT GATATTTGGT TTATCAAGTT TTCTTGTGAC CTCCATTTAA GTTCTGTTGC TATAGGTAAT CAGGACGGAA AGATTTATGT CTGGGATTTA AAAAGTTGCC CTCCTGTTTT GATTACAAAG TTATCACACA ATCAATCGAA GTCTGTAATC AGGCAAACCG CCATGTCTGT CGATGGAAGC ACAATTCTTG CTTGCTGTGA GGACGGGACT ATATGGCGCT GGGACGTGAT TACCAAGTAG TGGTCTGGGT CTTGTAGGAA TT |
| Length | 1152 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 8612912.. 8616716 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G20740.1 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| TAIR curator summary | Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization. |
| Alias | [FIE][FIE1][FIS3][FERTILIZATION-INDEPENDENT ENDOSPERM][FERTILIZATION-INDEPENDENT ENDOSPERM 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.16515 |
Ahg479492 | eukaryotic initiation factor 4A-III |
| 11.9164 |
Ahg924591 | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative |
| 12.3288 |
Ahg928901 | Galactose oxidase/kelch repeat superfamily protein |
| 15.1658 |
Ahg477114 | Aldolase-type TIM barrel family protein |
| 18.9737 |
Ahg494914 | |
| 21.5639 |
Ahg914115 | |
| 25.2389 |
Ahg485125 | transcription regulators;zinc ion binding |
| 30 |
Ahg494938 | Pentatricopeptide repeat (PPR) superfamily protein |
| 30.0167 |
Ahg933732 | Thioredoxin superfamily protein |
| 41.497 |
Ahg315054 | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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