Detail



ID : Ahg479599

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479599|fgenesh2_kg.3__2300__AT3G20730.1
Sequence
ATGCTGGTTG TTTCGGAAAG CTACTTATTA AGCCATCCTT TGTACCTCAA GGCTCTCAAG TTATGCAGCT ACCAAAACGT CAAGAAACAA CTTTTGTTGA TTCATGGGAA TTCGGTGACA AATGGGTTCG GCTCCAATCT CCAGTTGAAC GACATGTTGA TAGATTTGTA CTTAAAACAG GGAGATGTGA AACATGCACG TAAACTGTTC GATAGAATTC CTAAGAGAGA TGTGGTTTCT TGGACAGCTA TGATCTCGAG GTTTTCTCGA TGTGGATATC ACAGGGACGC GTTGTTGTTG TTCAAACAGA TGCACCGGCA AGATGTTAGG GCTAATCAGT TCACTTACGG GAGTGTTTTG AAGTCGTGTA AAGATTTGGG ATGTCTTAAA GAAGGGATGC AGATACAAGG TTGTTTGGAG AAAGGGAAAT GTGCAGGGAA CTTAATTGTG AGGAGTGCAT TGCTTTCTCT TTATGCCAGG TGTGGAAAGA TGGAGGATGC TCGTCTTCAG TTTGATTCAA TGATAGAAAG GGATTTGGTT TCTTGGAATT CAATGATCGA TGGATACACC GCCAATGCTT GTGCAGATAC TTCGTTTAGT CTGTTTCAGT TAATGTTCGC AGAAGGTAAG AAGCCAGACT GCTTCACCTT TGGAAGCCTC TTGAGAGCTT CTGTTGTAGT TAAGTGTCTT GAACCAGTCG GTGAATTACA TGGATTAGCG ATCAAGCTGG GTTTTGGAAG ATCAAGTGCT CTGATTAGGT CTCTGGTTGA TGCATATGTG AAGTGTGGTA GCATTGCCAA TGCTTGGAAA TTGCACGAGG ACACAACAAA AAGAGACTTA ATATCTTGCA CTGCTCTAAT TACAGGTTTT GCACAGCAGA ACATCTGCAC AAGTGATGCC TTTGATATCT TCAACGAGAT GATACTGATG AAAACAAAGA TGGACGAGGT TGTAGTATCG TCGATGCTTA AAATATGCAC CACCATTGCA TCGGTAACCA TTGGAAGACA GATCCATGGT TTTGCCTTAA AATCTTCCCA AATCAGATTT GATGTTGCTT TGGGTAACTC GCTGATAGAT ATGTATGCAA AGTCCGGGGA CATCGAGGAT GCAGTCCTCG CTTTCGAAGA GATGAAAGAG AAAGATGTGA GATCATGGAC CTCTTTGATC GCAGGATATG GAAGACATGG GAATTTTGAG AAAGCAATTG ATCTTTATAA CAGAATGGAG CATGAAGGGA TCAAACCGAA TGACGTTACA TTTCTTTCTC TCCTCTCTGC TTGTAGCCAT ACAGGACAAA CCGAACTAGG CTGGAAGATT TTCGACACAA TGATCAACAA GCACGGTATC AAAGCTCGAG AAGAGCACTT CTCTTGCATC ATAGATATGC TTGCGCGCAG TGGCTACTTG GACGAAGCTT ATGAACTGAT AAGAAGTAAA GAGGGTATTA TAAGTCTAAG CTCATCAACA TGGGGAGCTT TTCTTGATGC ATGCAGGCGC CATGGGAACG TGCAGCTCAG TAAAGTAGCA GCCGCACAGC TTCTGAGTGT GGAACCGAAG AAACCAGTCA ATTATATCAA TTTGGCCAGT GTACATGCAG CTAATGGAGC ATGGGACAGT GCTTTGAAGA CCAGACAGCT TATGAAAGAG AGTGCTTCCT GCAATAAAGC TCCAGGATAC AGCCTTGTGT ATTAAACAGA AGGGAATAAG ACAAAATCTC CACAAAGGGT TTACACTGTA GTACAAGAGT CGAAGTTAAC AAGGCTATAA AGAGCATCTC AAGGTCTCAA GGAGTAGAAG TGTAGAACCA TGATCAGAGT TACAATAAAA GAATGGATAT CTCTCCACAT TCCTAATTCA TCAATTCCTA CAAGATTCAG ACCACTACTT GGTAATCACG TCCCAGCGCC ATATAGTCCC GTCCTCACAG CAAGCAAGAA TTGTGCTACA ATCCCATGG 
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8610971.. 8613008
Download Sequence
A.thaliana
AGI-codeAT3G20730.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.1572 Ahg493617 DENN (AEX-3) domain-containing protein
26.9815 Ahg918912 secretion-associated RAS super family 2
28.2843 Ahg492699 beta-glucosidase 47
43.2666 Ahg937917
43.3359 Ahg940935 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
54.3875 Ahg487918 Cystathionine beta-synthase (CBS) family protein
57.6281 Ahg918145 P-loop containing nucleoside triphosphate hydrolases superfamily protein
66.5432 Ahg919552 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
67.3795 Ahg935688 Peptide chain release factor 1
68.4544 Ahg492065 Met-10+ like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression