Detail



ID : Ahg918912

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918912|scaffold_100193.1
Sequence
ATTCGTTGGA TCGTGCGGCG ATGTTCTTGG TAGATTGGTT CTACGGCGTG CTCGCTTCGC TAGGTTTATG GCAGAAAGAA GCCAAGATCT TGTTTCTAGG TCTCGATAAT GCCGGTAAAA CCACCTTGCT TCACATGTTG AAAGACGAGA GATTGGTGCA GCATCAACCA ACTCAGCATC CAACCTCTGA AGAGCTTAGC ATTGGCAAAA TCAAATTCAA GGCTTTTGAC TTGGGCGGTC ATCAAATTGC ACGAAGAGTG TGGAAAGACT ACTATGCTAA GGTTGATGCG GTGGTCTACT TAGTGGATGC TTATGACAAG GAGAGATTTG CAGAATCAAA AAAGGAGCTT GATGCACTTC TCTCAGATGA ATCCTTAGCC ACTGTCCCAT TCCTCATCCT AGGGAACAAA ATCGACATAC CTTACGCTGC ATCTGAGGAC GAGCTTCGAT ACCATCTTGG TCTCTCCAAT TTCACAACTG GTAAAGGCAA AGTGAATCTA ACTGATTCGA ATGTGAGACC ATTGGAGGTG TTTATGTGCA GCATTGTTAG AAAAATGGGA TATGGTGAAG GCTTCAAGTG GCTCTCTCAA TACATCAAAT AGATCGCGCT ATCCCTTTGA GT 
Length622
Protein Sequence
Protein Residue
Map Locationscaffold_1: 645784.. 647026
Download Sequence
A.thaliana
AGI-codeAT4G02080.1
Descriptionsecretion-associated RAS super family 2
TAIR curator summaryA member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.
Alias[ASAR1][ATSAR2][ATSARA1C][SAR2][secretion-associated RAS super family 2]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg481034 cold, circadian rhythm, and rna binding 2
4.58258 Ahg492278 arginine/serine-rich splicing factor 35
7.74597 Ahg487123
9.05539 Ahg916949 RNA-binding (RRM/RBD/RNP motifs) family protein
10.2956 Ahg491275
14.3527 Ahg938681 Tetratricopeptide repeat (TPR)-like superfamily protein
15.2315 Ahg356828 cold regulated gene 27
15.8114 Ahg477497 lipid phosphate phosphatase 3
15.8745 Ahg942557 isoamylase 3
16.3095 Ahg483725 AT hook motif DNA-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression